Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0228 ATGGAGTCTTCGGGGTGGTTCAAACCCAACACCGACGTAGCTCCCTCTTGCCCTCGCTGTGCCTCCTCCAACACCAAGTTCTGTTACTTCAACAACTACAGCTTCTCCCAACCCAGGTACTTCTGTAAATCATGCCGCCGCTACTGGACCAAAGGCGGCTCTCTCCGCAAAGTCCCCGTCGGCGGCGCTTCCCGTAAGACCCGCCCCGCTAAACCCTCTCGCCGTTCCCCTCAAACCTCGCGCCTTTCCATCAGTCTCATCTCCTGTTCTCGCGACCCACCTAATTCCCACCCTGAATCCGGTGGCTCCCATATTGACATGGCCCTTTTGTTCGCCAAGTTCTTTAACCAAAACACCACCTTCCACCAAGAATTCCATCACCAGCCCATGGATGGATCGTCCAGTTCATTGACACCGAAAAGCCTTGAAGCCCAGAACGATGAGACTCGACGGCCGTCCGATCCGGTCTCAGACTGCGATCACAATCTGATAGAGGGGCTTCCTAAGCAAGAGGCAGCTCAGAGTTTTTCGGGACATGAGTTGGAGGGTTTGTTTGGGGTGGATGAAGTGGTCCAAGATGTTCTCTGGTCTGACGCTACGACGTCGTCGGCGTTCGCCTGGGAACCTCCTAGTCCTATGATGGCATTTCCGGAGGAGTTGGAGTACTCGATGTCCATGGTGATGCCCTTCCTCCACGACGACCAATTCCCAATTACTTCCACAGTGCTTCCTTCAATTTAA 741 0.5425 MESSGWFKPNTDVAPSCPRCASSNTKFCYFNNYSFSQPRYFCKSCRRYWTKGGSLRKVPVGGASRKTRPAKPSRRSPQTSRLSISLISCSRDPPNSHPESGGSHIDMALLFAKFFNQNTTFHQEFHHQPMDGSSSSLTPKSLEAQNDETRRPSDPVSDCDHNLIEGLPKQEAAQSFSGHELEGLFGVDEVVQDVLWSDATTSSAFAWEPPSPMMAFPEELEYSMSMVMPFLHDDQFPITSTVLPSI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0228 246 MobiDBLite consensus disorder prediction 125 156 - -
Lele04g0228 246 MobiDBLite consensus disorder prediction 56 102 - -
Lele04g0228 246 ProSitePatterns Zinc finger Dof-type signature. 17 53 IPR003851 GO:0003677|GO:0006355
Lele04g0228 246 Pfam Dof domain, zinc finger 15 68 IPR003851 GO:0003677|GO:0006355
Lele04g0228 246 ProSiteProfiles Zinc finger Dof-type profile. 15 69 IPR003851 GO:0003677|GO:0006355
Lele04g0228 246 MobiDBLite consensus disorder prediction 73 97 - -
Lele04g0228 246 MobiDBLite consensus disorder prediction 125 143 - -
Lele04g0228 246 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 148 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0228 Lele-ChrLele04 1361033 1361773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0228 10 116 C2C2-Dof Transcription Factor Family AT3G52440 55.140 1.72e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele04g0228 zf-Dof 6.2e-31 No_clan