Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0223 ATGCTGTGCTTCCGAGGAGCATTGCCTTCTACCTATGGATCCATGAATGGAGTTCTAGTTTCAAAGTTAGGTTTGTATCTTTTTCTGTTGCGGTCACTTGGCAACCAAACAGAGTTGGTGAGCAGAAAAAGAGGAGTTAGTATAAGCTTAATTTACTGTACAATATTCGATCAATACCTCCGGGAGATAATGGGAAACAGACTGGAATTGTTGTTCGTGTTCTCAACGGCCCTCGTGATTGGAGCAATGTTCTTTCGTGTTGGAGCCGAGCCGGTGGAAGATAAACAAGCCTTGCTTCATTTCCTCCACAACATAAACCATTCTCTTGCTCTAAACTGGGATGAAAAATCTTCTGTATGCAATAGCTGGAGAGGAATCACCTGCGATAGAGACCATGCCAGGGTCATAGCCCTTCATTTACCTGCAGTTGGATTGAGCGGTCCAATACCACCGAAGACCCTGAGTCGCCTCTCAGCACTCCAGACTCTGAATCTAACATCCAATAGCATAACGGGTCCTTTTCCTTCTGGTTTCTCTGAGCTTAAGAATTTAACCTATCTTAACATTCAGGTCAACGAGTTTTCTGGCCCATTGCCATCATATTTCTCAGCTTGGAAGAACTTGACTGTTGCTGATTTATCCAACAATTTTTTTAATGGGAGCATACCTTCATCAATTTCGAATCTGATTCATCTCACATCTTTAGTCCTGGAAAATAACTCGCTTTCGGGTGAAATTCCTGATATCAATATTCCTACCCTGCAAGAGTTGACTCTGGCCAACAATAATCTTAGTGGGATGGTGCCCAGATCCCTTACGGGATTCCCAAGTTGGGCGTTTTCGGGGAACAATCTTTCATTTGCAAATGCTCAACCAAGAAAGAAAACCTCAAAAAGACTTGGTAAGTCTGCATTAATAGGTGTCATTCTAGGTGGTACTGGGCTGGCATTTGGACTTATTGCTGCTTTCTTGCTTTTGTGCTACTACGATAAAGGAGGTGAAAACGGGCTGGCAATGAAATCCCAGAAAAAAGACATGTTTCGGAAAAAGGACATCTCTGAGAGTCGTTGCAGAAAAAACAAGATTGAGTTCTTTGAGGATTGCAATTTCGCGTTTGACCTGGAGGATCTGTTGAGAGCATCTGCTGAGGTGCTTGGTAGAAGTGGGGAAGAAAGGATTTCTTTAGATTGGGATAGCAGGCTGAGGATTGCAATAGGTGCGGCAAGAGGCATTGCTCACGTCCATGCTCAACAGCTAGGAAAACTCGTCCATGGAAACATAAAAGCCTCCAACATCTTCCTCAACTCCGAAGGCTATGGCTGTATTTCTGACATTGTTTTAGCAACACTCATGAGTCCAATACTGCCACCTTCTCTACGAAGTTCCGGCTACCGTGCTCCAGAAGTAACAGACCCCAAAAAAGCAAGCCACGCGTCTGATGTCTACAGTTTTGGGGTGTTTCTGTTGGAGATTTTGACTGGAAAAGGCCCCATGCACGCCACAGGAAGTGAGGAGGCCGTCCACCTGGTTAGGTGGGTGAATTCTGTGGTCAGAGAGGAATGGACAGCTGAAGTATTTGATGTACAATTGCTGAGATTTCCAAATATAGAGGAAGAAATGGTTCAAATGTTACAGCTTGCGATGGCATGTGTTGTTAGAGTTCCAGAGCAGAGACCGAAAATGGCTGATGTTTTAAGAACGATGGAGGAAATTCTTCGACCAAATACTGAGAATCGGCTGTCGTCTGAATCCAGATCAGCTGCTTCTACTCCGACACCACCGGCAATTGACGTACCTTCTTCTTATGTGGATGCTTAG 1818 0.4444 MLCFRGALPSTYGSMNGVLVSKLGLYLFLLRSLGNQTELVSRKRGVSISLIYCTIFDQYLREIMGNRLELLFVFSTALVIGAMFFRVGAEPVEDKQALLHFLHNINHSLALNWDEKSSVCNSWRGITCDRDHARVIALHLPAVGLSGPIPPKTLSRLSALQTLNLTSNSITGPFPSGFSELKNLTYLNIQVNEFSGPLPSYFSAWKNLTVADLSNNFFNGSIPSSISNLIHLTSLVLENNSLSGEIPDINIPTLQELTLANNNLSGMVPRSLTGFPSWAFSGNNLSFANAQPRKKTSKRLGKSALIGVILGGTGLAFGLIAAFLLLCYYDKGGENGLAMKSQKKDMFRKKDISESRCRKNKIEFFEDCNFAFDLEDLLRASAEVLGRSGEERISLDWDSRLRIAIGAARGIAHVHAQQLGKLVHGNIKASNIFLNSEGYGCISDIVLATLMSPILPPSLRSSGYRAPEVTDPKKASHASDVYSFGVFLLEILTGKGPMHATGSEEAVHLVRWVNSVVREEWTAEVFDVQLLRFPNIEEEMVQMLQLAMACVVRVPEQRPKMADVLRTMEEILRPNTENRLSSESRSAASTPTPPAIDVPSSYVDA 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0223 605 FunFam Probable inactive receptor kinase RLK902 91 250 - -
Lele04g0223 605 Pfam Leucine rich repeat N-terminal domain 93 129 IPR013210 -
Lele04g0223 605 Gene3D Ribonuclease Inhibitor 92 295 IPR032675 -
Lele04g0223 605 Gene3D Transferase(Phosphotransferase) domain 1 373 590 - -
Lele04g0223 605 ProSiteProfiles Protein kinase domain profile. 294 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0223 605 PANTHER OS05G0588300 PROTEIN 77 388 - -
Lele04g0223 605 SUPERFAMILY Protein kinase-like (PK-like) 390 578 IPR011009 -
Lele04g0223 605 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 374 582 - -
Lele04g0223 605 Pfam Protein kinase domain 402 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0223 605 SUPERFAMILY L domain-like 103 277 - -
Lele04g0223 605 MobiDBLite consensus disorder prediction 574 596 - -
Lele04g0223 605 Pfam Leucine rich repeat 149 193 IPR001611 GO:0005515
Lele04g0223 605 MobiDBLite consensus disorder prediction 573 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0223 Lele-ChrLele04 1332904 1335724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0223 70 573 Receptor kinase-like Gene Family AT5G24100 35.563 4.26e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele04g0223 Pkinase 9.1e-17 CL0016