Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0211 ATGGGATATCTAACAGACAATGCCCTTCTCGAATTGTTGCAGGGAGAGTCTCTGGTGCATGGAGAAGCTATGCAGACTGAGTTTCAGGAGTGGAATTGGAATGATGAGAACCTATATTCTGTTGAAAGTAACACAAGCCACCCAGGGAGAATCACATTATCGCTAAAGTCAGTTTCTATGAAATTTCAAAGAGGCTTCCAATCTGGTTCTGAGAGAATAAAGAGATTTAGAAATTCATTCAAATCTTTTCCTTACAATAGCGTGCTGGCTAGGAGTTTTAGTTCTACAAATAAAATACTTGATCCACAGGGCTCATTCCTTCAAAAGTGGACCAAGATATTTGTATTATCATGTCTTATTGCTGTATCACTAGATCCTTTGTTCTTTTACGTCCCTGTCATTGATCGTGAGAAGAAATGCCTTTCATTGGACCACAAGATGGAGATAACAGCTACCGTTCTAAGATCTTTCTGTGATATTTTTTATATAATCCACATAATTTTCCAATTTCGTACTGGATTTATTGCTCCCTCTTCTCGAGTGTTTGGAAGAGGCGTTTTGGTTGAAGATACTTGGGCCATAGCGAGAAGGTATCTGTCCTCGTACTTTTTGATTGACATTCTTGCTGTTCTTCCCCTCCCACAGGTGGTGATTTTGATTGTCATTCCGAAGTTAAGACGAGGCTTTAAATCGCTGAACACGAAGAACCTTCTAAAATTTGTTGTTTTCTTCCAATATGTACCAAGGTTTCTACGTGTTGTTCCTTTATGTAAAGAAATCACAAGGACCTCTGGCGTTCTCACTGAAACTGCTTGGGCTGGAGCAGCATTCAATCTTCTTCTTTACATGCTTGTGAGTCATGTTTTTGGTGCCTTTTGGTACTTGTTTTCTATAGAACGCGAAACCACTTGCTGGCAACGAGCCTGCAGAAGAAATGGTACATGTCACAAGGCAGCTCTGTATTGTAGTTCTCCAGGGTCAAGTGACATTGTAAACTACTTGAACGCCTCTTGCCCAATACAAGAGGCAAATACTACACTTTTTGATTTTGGAATATTCCTTGATGCGCTTCAGTCTGGTATCGTGGAGTCAGGAGATTTCCCACAAAATTCTCTTGGTCAGAACCTGACAACAAGTACATATGTTTGGGAGACCATCTTTGCTGTTTTCATCTCCATCTCTGGTTTGGTTTTATTCTCATTTCTCATCGGAAATATGCAGGGTCTTTACAAAATTTTACTTGTTCTGAAACAGACATATCTGCAGTCAACAACTACGAGATTGGAGGAGATGAGAGTCAAAAGAAGAGATGCAGAACAATGGATGTCTCATCGGTTGCTCCCTGATAGTCTGAGAGAGCGAATCAGACGATATGAACAATACAAATGGCAAGAGACCAGAGGTGTTGATGAAGAAAACTTGATCCGTAATCTTCCTAAGGATTTACGTAGGGACATTAAGCGTCATCTTTGCCTGGCTCTGCTGATGAGAAAAATGGATGAACAACTGTTGGATGCAATGTGTGACCGTCTGAAGCCAGTGCTTTACACGGAAGAAAGCTGCATTGTTCGGGAAGGAGACCCGGTGGACGAGATGGCGTTCATAATGCGAGGCAAACTGCTGACGGTACAAACCCTCGTGGAAGTTGAAGCATTTGCCCTCAAAGCTGATGACTTGAAGTTTGTGGCGTCTCAGTTCAGGCGTCTTCACAGTAAGCAGCTTCGTCACGCTTTCAGGTTCTACTCCCAACAATGGCGGACATGGGCGGCGTGCTTCATACAAGCGGGGTGGCGGCGATATAGCAAGAAGAAGGTGGAAGAGTCTCTGAGGGAAGAAGAGAATAGGCTGCAAGATGCATTGGCAAAGGCGGGTGGGACCTCTCCCAGCCTTGGTGCCACAATATATGCTTCCAGATTTGCTGCTAATACACTTCGAGCTTTACGACGTAAACGGTCGAGGAAGACAAGGCTACCCGAAAGATTTCCACCCATGTTGCTTCAGAGGCCTGCAGAACCCGATTTTACAGCCGATGAGCAATCATAA 2043 0.4327 MGYLTDNALLELLQGESLVHGEAMQTEFQEWNWNDENLYSVESNTSHPGRITLSLKSVSMKFQRGFQSGSERIKRFRNSFKSFPYNSVLARSFSSTNKILDPQGSFLQKWTKIFVLSCLIAVSLDPLFFYVPVIDREKKCLSLDHKMEITATVLRSFCDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDTWAIARRYLSSYFLIDILAVLPLPQVVILIVIPKLRRGFKSLNTKNLLKFVVFFQYVPRFLRVVPLCKEITRTSGVLTETAWAGAAFNLLLYMLVSHVFGAFWYLFSIERETTCWQRACRRNGTCHKAALYCSSPGSSDIVNYLNASCPIQEANTTLFDFGIFLDALQSGIVESGDFPQNSLGQNLTTSTYVWETIFAVFISISGLVLFSFLIGNMQGLYKILLVLKQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEENLIRNLPKDLRRDIKRHLCLALLMRKMDEQLLDAMCDRLKPVLYTEESCIVREGDPVDEMAFIMRGKLLTVQTLVEVEAFALKADDLKFVASQFRRLHSKQLRHAFRFYSQQWRTWAACFIQAGWRRYSKKKVEESLREEENRLQDALAKAGGTSPSLGATIYASRFAANTLRALRRKRSRKTRLPERFPPMLLQRPAEPDFTADEQS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0211 680 SUPERFAMILY cAMP-binding domain-like 429 574 IPR018490 -
Lele04g0211 680 MobiDBLite consensus disorder prediction 650 680 - -
Lele04g0211 680 Gene3D Helix hairpin bin 426 491 - -
Lele04g0211 680 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 84 541 - -
Lele04g0211 680 CDD CAP_ED 495 581 IPR000595 -
Lele04g0211 680 Pfam Ion transport protein 110 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele04g0211 680 Gene3D - 112 411 - -
Lele04g0211 680 FunFam Cyclic nucleotide-gated ion channel 1 427 491 - -
Lele04g0211 680 Gene3D Jelly Rolls 494 545 IPR014710 -
Lele04g0211 680 SUPERFAMILY Voltage-gated potassium channels 101 410 - -
Lele04g0211 680 ProSiteProfiles cAMP/cGMP binding motif profile. 495 540 IPR000595 -
Lele04g0211 680 Coils Coil 602 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0211 Lele-ChrLele04 1221437 1225318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0211 28 678 Ion Channels AT5G53130 68.194 0.0 939