Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0205 ATGTATGCGGACACTGATCTCTTGTTCCCGTATTTCCAGAATTCATCTCAAGAGCTTCAACAACTCGACGAGTACTGTAAAACCCATAAGCCCAATGCTTCAATGAGTGACCTTGCTCAGACTTCTGCCATGTCGGAGTATTTTGATTTGGCAGCAGAAGGAGACCTGTTCAAAGCTCCCGAACCTATATTTGAAGAACCAGTCATGGACTTGGATCCCATGACGGCAGCCATTTCAATGATATCTTGTGGGGAAGACGTTGTCTCCTCACAGGGACTACAACCCTCAGACTCACTTCAACACGAACAACTCCTGAGCGAGGTTTTCTATGAATGCAAAAAAGACATGCTCGAAAAGGAAGCAATTGAGTCACCTCTATCTGAGATTCTGGAAATCAAGGTTCCTACTCTGAATACAGATGAAAACCAAACTCAAGAAAGTAAACCATTTCCTGGCTTGCCATTACCGAAAAGTGTGAGTTCAGGATGTTTGAGCTCAATGGACTGGATGCAAGGAACTTCAATGAAGCCTTCTTTTATTGATTTCCCAGGAATTAATTTCTGTGCAGATTATGGCATGCGGAGGGCATTTAGTGAAGGAGATATAAAGGCTCTTGGTAGTGGTAATATGCACGCTATCCAATCTCCCTTAGAGAGGCCCTTTCCTGCCAGTAATTGTACCGGCGAGGAACGCCGAGAAAAGCTCTCGAGATACAGGAGTAAGAGGACGAGGAGAAATTTTGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAACCAAGAATCCGTGGAAGATTTGCCAAGACTCAAGAATTTGACGCCAGGAGGCAATGATCTTTCAATCTGGAATGCTCCACTGTTAGAGTTGCTTCCGCTTTTGGATTCAAGAACTGGATTGCTTAG 915 0.447 MYADTDLLFPYFQNSSQELQQLDEYCKTHKPNASMSDLAQTSAMSEYFDLAAEGDLFKAPEPIFEEPVMDLDPMTAAISMISCGEDVVSSQGLQPSDSLQHEQLLSEVFYECKKDMLEKEAIESPLSEILEIKVPTLNTDENQTQESKPFPGLPLPKSVSSGCLSSMDWMQGTSMKPSFIDFPGINFCADYGMRRAFSEGDIKALGSGNMHAIQSPLERPFPASNCTGEERREKLSRYRSKRTRRNFGRKIKYACRKALADSQPRIRGRFAKTQEFDARRQXSFNLECSTVRVASAFGFKNWIA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0205 304 Pfam CCT motif 231 273 IPR010402 GO:0005515
Lele04g0205 304 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Lele04g0205 304 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 103 275 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0205 Lele-ChrLele04 1154752 1161392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0205 230 275 C2C2-CO-like Transcription Factor Family AT5G57660 54.348 2.29e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele04g0205 CCT 7.6e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0203 01 1139818 1142035 Lele04g0205 04 1154752 1161392 hybridization
Lele02g0204 02 1103689 1107713 Lele04g0205 04 1154752 1161392 hybridization