Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0179 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGGTTAAACAGCAGCCTGTGGTGGAAGGTTCAATTCCAAAGCCTCCTATGACCGAAAGAAAGGCGAGGCCTCAGAATGATCAAGCTCTGAACTGCCCAAGGTGCAACTCAACCAACACTAAATTCTGCTACTACAATAACTATAGCCTCTCTCAGCCAAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACCGAAGGTGGGTCCCTCAGAAATGTTCCCGTGGGTGGAGGCTCCCGAAAGAACAAGAGATCTTCATCTTCATCCTCATCAGCAATACCCTCAAAGAAGCTTCCTGATCTGAACCCCAAGATCCAGCAAGGCCAAGATCTTAACTTAGCATGCCCCCCACCACCAGCACCCGAGGACTATAACAATAGCATATCGAAATTCATCGAGGTTCCTTTTAGTGCTGAAGACAAGACTACCCATTCTCATCATCATGATCAGTTATCCTCCATGGAGCTTCTGAAAACTACCGGAATTCCTTCGTCAAGGACTTTGTGTTCGTTGATGCCTATGTCGGCGTCGGATTCTTCCTGTTCAACAATGTATAATTCAAGTGGGTTTCCTAATTTGCAAGATTTTAAGCCTCCTCCTCCAGGGCTTAGTTTCAGTCTTGAAGGGTTTGCAAATGGGTACGGGGGTATTTCTGGAATGCACGAGGGAAGCAGTGGCGATGGTGGGGCAAGGTTGTTGTTTCCTACTGATGATTTGAAGAGAGTTCCTAGTAGTACTGATCATTATGAGCAGAATAGGAGCCATGCGGATTCAACGGGCTTTTGGAATAGCATGTTAGGTGGAGGATCGTGGTGA 849 0.4711 MDTAQWAQGIGVVKQQPVVEGSIPKPPMTERKARPQNDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSSSSAIPSKKLPDLNPKIQQGQDLNLACPPPPAPEDYNNSISKFIEVPFSAEDKTTHSHHHDQLSSMELLKTTGIPSSRTLCSLMPMSASDSSCSTMYNSSGFPNLQDFKPPPPGLSFSLEGFANGYGGISGMHEGSSGDGGARLLFPTDDLKRVPSSTDHYEQNRSHADSTGFWNSMLGGGSW 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0179 282 MobiDBLite consensus disorder prediction 90 107 - -
Lele04g0179 282 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Lele04g0179 282 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Lele04g0179 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 183 IPR045174 GO:0003700|GO:0006355
Lele04g0179 282 MobiDBLite consensus disorder prediction 82 122 - -
Lele04g0179 282 Pfam Dof domain, zinc finger 38 95 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0179 Lele-ChrLele04 993705 995056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0179 28 282 C2C2-Dof Transcription Factor Family AT3G61850 45.985 3.59e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele04g0179 zf-Dof 1.1e-33 No_clan