LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g0172	ATGATTGATTCACTCAGAGTAGGCTATTTGGAGAGTCCAATGGGTACTTTGAACAATGAAGAACGCAGAGAGATTGAGAATTTGGGTGCTGAAGAAATGGAAGGGGCTCGAGTAGTCCCGGAGGATGTGAGTAGAATTGCGCCATGGACAAGACAGATCACAATTCGAGGACTAATAGCTAGCATACTCATTGGAATCATTTATAGTGTGATAGTGATGAAGTTGAACCTCACAACTGGGCTAGTCCCCAATCTCAATGTCTCAGCTGCTCTTCTTGGCTTTGTCTTCATCCGAACTTGGGCTAAACTTCTAGAGAAGGCTAAGATTGTTTCAACGCCTTTCACTAAACAGGAGAATACCATAATTCAAACTTGTGCTGTGGCATGCTATAGCATCGCAGTAGGAGGTGGTTTTGGGTCTTACCTTTTGGGTCTGAATAGGAAGACGTATGAACAAGTAGGGGTTGAAATCGAAGGGAATACTCCTGGGAGCACCAAAGAACCTGGGATTGGTTGGATGACTGGTTTTCTCTTTGTGACAAGCTTTGTTGGGCTTTTGGCTTTGGTTCCTCTGAGAAAGGTATTGATAATAGATTACAAATTAATGTATCCAAGTGGAACTGCCACTGCTGTTCTTATAAACGGCTTCCATACAACTAAAAGGGATGAGCAGGCCAAGAACCAGGTCCATGGTTTCATGAAATACTTTTCTTTGAGTTTTTCCTGGGCTTTCTTTCAGTGGTTCTATTCAGGTGGAGATCAATGTGGATTTGTTCAGTTTCCTACCTTTGGGTTGAAAGCCTGGCGTAACTCATTCTACTTTGATTTTAGTATGACTTACATTGGAGCTGGAATGATTTGTTCACATCTTGTCAACTTATCTTTGCTTCTTGGTGCCGTGCTTTCATGGGGTGTTATGTGGCCGTTGATTAGGGGACGCAAAGGAGAGTGGTTTCCTGAAAATTTATCAGAAAGCAGTATGAAGAGTCTTAATGGTTATAAGGTTTTCATTTCCATTGCCTTGATCCTTGGTGATGGGCTTTACAACTTCTTCAAAATAATTTATTTCACTGCCGCAAATATCGTTCCCACAATAAAAAGGAGGAGCATTAAAGAAGCATCAGACAACCAGAGGACGCCCTTCGATGATGTTCGACAGAATGAAGTGTTCACAAGAGAAAGCATTCCGATATGGTTGGCATGTGCAGGATACATATTATTCGCCATTGTTTCTATCATTATAATCCCATTGATGTTCCCAGAGTTAAGGTTGTATTACATAGTGGTGGCCTATCTGCTCGCACCTTCTCTCAGCTTCTGCAACGCCTATGGCGCCGGCTTAACCGACATGAACATGGCCTATAACTATGGGAAAGTGGCACTGTTTATGCTGGCAGCCTTGGCCGGCAAAGACAACGGAGTGGTTGCCGGACTTGTGGGGTGTGGCCTGATTAAATCCATTGTTTCCATCTCATCTGATTTGATGCATGATTTCAAGACCGGCCATCTCACCTTCACGTCGCCTCGTTCCATGCTTATGGCACAGGCTATAGGGACAGCAATAGGATGTGTGGTGGCTCCTTTGACATTCTTCCTCTTCTACAAGGCATTTGATGTGGGGAATCCAGATGGTGAATACAAGGCCCCATATGCCATTATATACAGAAACATGGCAATCCTGGGTGTGCAAGGCTTTTCAGCACTACCACATCATTGCTTGCAGCTGTGTTATGGGGCTTTCACGTTCGCGATAGCAGCCAATTTGGTGAGAGATCTGAACCCTAGGGATATTGGGAAATGGGTTCCTCTCCCAATGGCGATGGCGGTGCCATTTTTAGTAGGGGCTTACTTTGCAATAGACATGTGCGTGGGTAGTTTGGTTGTGTATGTTTGGCACTCACTGAACGGCAGGGAAGCAAGGCTGATGATTCCTGCGGTTGCTTCTGGATTGATTTGTGGAGATGGCATGTGGATTCTGCCCTCATCTATTCTTGCTTTGCTTAAGATTCGTCCTCCAATCTGCATGAGCTTCTTGCCCTCTAGTCTCAAATCACATTCAAACCGCAGCATGTCCTCGATTGATATGAGATTCAAAGGGTCTGAAAATGAGTTCCTTGTTTCATCTCCAAACCATTGGGCTGACTCATTTGAACACGGCGGAGGCGTGAGCTTGACAGCATTGGACATCGGCAATCGGGTGTGGGAAACGAAGCTCCGTATCTGGGAAAAAGCCCTCTACTTGGTTGCATTCTTGATCCTTTTTATCATCGTTGTTCCCGAATGTAATTTTGTGGGTTTGACTGAAGAATTTTCCGGTCCTCTGTATGTATTTGATCTTTGTGGCAGGTGGCAGAGTAAAAGATGGCTTCGGATAAAAAAGTTTTCCTGTACGAAGAAGTGGCAAAGCACAATCAGATCAAAGATTGTTGGCTTATCATATCTGGGAAGCACAGGGTTTAGTCTGGTAGTTGTCTATGATGTTACCCCTTTTATGGAAGATCATCCTGGAGGTGATGATGTTCTGTTATCTTCCACAGGAAAAGATGCAACCAATGATTTTGAAGATGTGGGACACAGCGATTCAGCTAGAGAAATGATGGGAAAATACTGCATTGGAGAGATTGATGCAACAACCATCCCGAAGAAGCGCAAGTACGTTTCATCTCAGCAGCCTTCTTACAATCCCGACAAGACCAATGATTTTGTGGTCAAGATTCTGCAGTTCCTTCTCCCTCTCCTCATATTGGGGTTAGCATTTGCTGTCCGACAATACACCAAGAAAGATTAG	2787	0.4421	MIDSLRVGYLESPMGTLNNEERREIENLGAEEMEGARVVPEDVSRIAPWTRQITIRGLIASILIGIIYSVIVMKLNLTTGLVPNLNVSAALLGFVFIRTWAKLLEKAKIVSTPFTKQENTIIQTCAVACYSIAVGGGFGSYLLGLNRKTYEQVGVEIEGNTPGSTKEPGIGWMTGFLFVTSFVGLLALVPLRKVLIIDYKLMYPSGTATAVLINGFHTTKRDEQAKNQVHGFMKYFSLSFSWAFFQWFYSGGDQCGFVQFPTFGLKAWRNSFYFDFSMTYIGAGMICSHLVNLSLLLGAVLSWGVMWPLIRGRKGEWFPENLSESSMKSLNGYKVFISIALILGDGLYNFFKIIYFTAANIVPTIKRRSIKEASDNQRTPFDDVRQNEVFTRESIPIWLACAGYILFAIVSIIIIPLMFPELRLYYIVVAYLLAPSLSFCNAYGAGLTDMNMAYNYGKVALFMLAALAGKDNGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTFTSPRSMLMAQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIIYRNMAILGVQGFSALPHHCLQLCYGAFTFAIAANLVRDLNPRDIGKWVPLPMAMAVPFLVGAYFAIDMCVGSLVVYVWHSLNGREARLMIPAVASGLICGDGMWILPSSILALLKIRPPICMSFLPSSLKSHSNRSMSSIDMRFKGSENEFLVSSPNHWADSFEHGGGVSLTALDIGNRVWETKLRIWEKALYLVAFLILFIIVVPECNFVGLTEEFSGPLYVFDLCGRWQSKRWLRIKKFSCTKKWQSTIRSKIVGLSYLGSTGFSLVVVYDVTPFMEDHPGGDDVLLSSTGKDATNDFEDVGHSDSAREMMGKYCIGEIDATTIPKKRKYVSSQQPSYNPDKTNDFVVKILQFLLPLLILGLAFAVRQYTKKD	928

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g0172	928	Pfam	OPT oligopeptide transporter protein	52	664	IPR004813	GO:0035673
	Lele04g0172	928	SUPERFAMILY	Cytochrome b5-like heme/steroid binding domain	824	882	IPR036400	-
	Lele04g0172	928	PANTHER	OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED	43	678	IPR045035	GO:0035673
	Lele04g0172	928	Pfam	Cytochrome b5-like Heme/Steroid binding domain	823	874	IPR001199	-
	Lele04g0172	928	SMART	Cyt_b5_2	819	875	IPR001199	-
	Lele04g0172	928	Gene3D	-	786	878	IPR036400	-
	Lele04g0172	928	TIGRFAM	OPT_sfam: oligopeptide transporter, OPT superfamily	46	661	IPR004813	GO:0035673
	Lele04g0172	928	PRINTS	Cytochrome B5 signature	862	874	IPR001199	-
	Lele04g0172	928	PRINTS	Cytochrome B5 signature	834	848	IPR001199	-
	Lele04g0172	928	PRINTS	Cytochrome B5 signature	824	834	IPR001199	-
	Lele04g0172	928	PRINTS	Cytochrome B5 signature	849	856	IPR001199	-
	Lele04g0172	928	ProSitePatterns	Cytochrome b5 family, heme-binding domain signature.	830	837	IPR018506	GO:0020037
	Lele04g0172	928	ProSiteProfiles	Cytochrome b5 family, heme-binding domain profile.	818	875	IPR001199	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g0172	Lele-ChrLele04	948795	955158	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g0172	824	928	NADPH P450 reductases	AT5G53560	75.238	6.40e-52	176