Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0164 ATGGGCCATTGCTGCAGCAAAAACCTTTCCGCCGTCGACAATGAAACCTCCCACCCAGAATCTCACCACAAACCTCCTCATTCCGCTGCATCGCCCCACTCTTCTGTCCATTCTGTCTACGGAGCCACCGATGCCACCCCTGCCCGCCATAGTTACGCCTCCACCAGTCCCTTTAACAGCCCCCTCGCACCTTCTCCGGGCGGGACTCCAGGTAGGAAATTTCGATGGCCTCTGCCGCCCCCGTCGCCCGTGAAGCCTATCATGGCGGCAATACTGAAAAGGCAGGGGAAGGCTCAGCCTAAGGAGGGGTCCATACCGGAGGAGCAAGGAGGAAGTATGCCGGGTGAGAGGCCGCTGGATAAGAGCTTTGGGTTTGCCAAGAATATTGGCGCCAAGTATGAGCTGGGGAAAGAAGTAGGTCGAGGGCACTTTGGTCATACTCACTTGGCCAAAGCAAAGAAGGGAGTGCTCAAGGGGCAGTCTGTAGCTGTCAAAATAATATCCAAAGCCAAGATGACAACAGCCATAGCAATTGAAGATGTACGGAGGGAGGTGAAAATGTTGAAAGCCTTATCTGGTCATAAAAATGTAGTCAAGTTTCACGATGCATTTGAGGATGCCAATAACGTCTACATAGTGATGGAATTGTGCGATGGAGGAGAACTGCTTGATAGAATTCTCTCGAGAGGGGGAAGATACACAGAAGAAGATGCTAAAGCTATTATTGTACAAGCTCTAAACGTAATGGCCTATTGTCATCTTCAAGGAGTTGTTCATCGTGATCTAAAACCAGAGAATTTTCTCTTTGTCTCAAAAGATGATGATGCTCTGATGAAGGTTATTGACTTTGGTCTATCTGATTTCGTGAGACCAGATCAACGGCTGAGTGATGTTGTTGGCAGTGCCTACTTTGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGCAGATTTATGGAGTATTGGGGTTATAACATACATATTATTGTGTGGAAGCAGACCATTCTGGTCACGCTCTGAATCAGGAGTCTTTCGGTCTGTGCTAAAAGCTCATCCTAACTTCGATGATTCGCCTTGGACGTCTGTATCACCGGAGGCTAAAGACTTTGTAAAGAGACTTTTGAACAAGGATCTCAGGAAAAGGATGAGTGCTGCCCAAGCATTAAAGTCACCTCCCTCCCTATTTGCAGCTCACCCGTGGTTGAGAGATGAGAATCAAGCCATTCCATTAGACATTTTAATCTACAAGCAAGTCAAGTCATATTTGCATGCCACCCCTTTGAAACGTGCCGCACGCAAGGCTCTCACTAAAGCATTGACAGAAGATGAGCTGATCTACCTTAGAGCACAGTTTAGCCTCTTGGAACCCAAAAATGGCTGCATTTCCCTTGACAGTTTTAGAGAGAATATGCTGAACTGTGTAACTTTTTGGACCAAGATGGATTCACCCGCCTCCATAAAAATGGACTTGGAAGAGTTTTGTGCTGCTGCAATCAGTGTATACCAGCTTGAGGTTCATGAAGAGTGGGACAATATCTCAAAAACAGCATTCGAATATTTCGAGCAGGCAGGAAACAGAGTCATCTCAGTTGAGGAGTTGGCAAAGGAGATGAATCTGGGAACTTCATCTTACTCTTTACTGGGCAACTGGATCCGGGAATCCGACGGAAAACTCAGCTCTGTCGGATATACTAAGTTTTTGCACGGCATCACTATTCGCCGTTCAAACACAAGACGACGGCAGAATGATGCGTGA 1761 0.4696 MGHCCSKNLSAVDNETSHPESHHKPPHSAASPHSSVHSVYGATDATPARHSYASTSPFNSPLAPSPGGTPGRKFRWPLPPPSPVKPIMAAILKRQGKAQPKEGSIPEEQGGSMPGERPLDKSFGFAKNIGAKYELGKEVGRGHFGHTHLAKAKKGVLKGQSVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHKNVVKFHDAFEDANNVYIVMELCDGGELLDRILSRGGRYTEEDAKAIIVQALNVMAYCHLQGVVHRDLKPENFLFVSKDDDALMKVIDFGLSDFVRPDQRLSDVVGSAYFVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWSRSESGVFRSVLKAHPNFDDSPWTSVSPEAKDFVKRLLNKDLRKRMSAAQALKSPPSLFAAHPWLRDENQAIPLDILIYKQVKSYLHATPLKRAARKALTKALTEDELIYLRAQFSLLEPKNGCISLDSFRENMLNCVTFWTKMDSPASIKMDLEEFCAAAISVYQLEVHEEWDNISKTAFEYFEQAGNRVISVEELAKEMNLGTSSYSLLGNWIRESDGKLSSVGYTKFLHGITIRRSNTRRRQNDA 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0164 586 Pfam Protein kinase domain 133 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0164 586 FunFam CDPK-related kinase 3 125 297 - -
Lele04g0164 586 PANTHER SERINE/THREONINE-PROTEIN KINASE 117 553 - -
Lele04g0164 586 FunFam CDPK-related kinase 1 126 221 - -
Lele04g0164 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Lele04g0164 586 ProSitePatterns Protein kinases ATP-binding region signature. 139 165 IPR017441 GO:0005524
Lele04g0164 586 MobiDBLite consensus disorder prediction 94 116 - -
Lele04g0164 586 CDD STKc_CAMK 132 402 - -
Lele04g0164 586 Gene3D - 427 543 - -
Lele04g0164 586 SMART serkin_6 133 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0164 586 FunFam Calcium-dependent protein kinase SK5 305 408 - -
Lele04g0164 586 SUPERFAMILY Protein kinase-like (PK-like) 132 421 IPR011009 -
Lele04g0164 586 SUPERFAMILY EF-hand 437 540 IPR011992 -
Lele04g0164 586 Gene3D Transferase(Phosphotransferase) domain 1 222 419 - -
Lele04g0164 586 Gene3D Phosphorylase Kinase; domain 1 126 221 - -
Lele04g0164 586 Gene3D - 420 500 - -
Lele04g0164 586 MobiDBLite consensus disorder prediction 48 62 - -
Lele04g0164 586 ProSiteProfiles Protein kinase domain profile. 133 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0164 586 MobiDBLite consensus disorder prediction 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0164 Lele-ChrLele04 919646 922946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0164 46 575 EF-hand Containing Proteins AT3G50530 55.190 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele04g0164 Pkinase 3.2e-67 CL0016