Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0161 ATGACACCCCCTTCTACTGTTCTATATTCTCTTTCTTTGTATCTTATCTTCCTTAATCAACATCATTTTACGACTAATTACGAAGTGGAACAGTATAATGTTGATAATGGCACCGTGCAGCAGCCAATCTCAATTCTTGAATTTCGTTTTCATGTCATATGCATTTATATGGGTGAATTTGGCGTTTCGGACAAGGAAGGTGCAAACAATAGTAGCAATGGTGGTGTTGGGTTGGGTATGACGGTGCAGAAGCAGAACCTTGAAGCATTCCCTAGTAAGACCATGATGATGATGATGGTTCCCCCTCCTCATAATCATCACGATCCTCCACTATATGGTCCCTTTGCTGCTGCTGGTGATTGTGATGGTCCTACCCCTTGTAAGTCCCTGACTCATTATACAAACCATTTTGTTAATGCTGCTTCTGCTTCTGGTGCTGCACTTGTTAGACCCTTGCAGCCTTTTCACGTTTCTGCTTCAACCGCCTTCAAATCCTCAGGAGGGGTGATGTCGGCTTCACTGGGGTTTCCTTTCACACAAGCACAATGGAAGGAGCTCGAAAGACAAGCAATGGTATACAAGCACATGATGGCCTCTATTCCTGTTCCTCCTCATCTGCTTATCCCTGTGCCTGCTTCTCGCTCTCCCTTGGATGCCGGTTTCAATCTAAGGTTCTCAAGCAGTAGTGATGCAGAGCCAGGGAGGTGCAGAAGAACAGATGGGAAAAAATGGAGATGTTCAAGAGACGTAGCCCCTAACCACAAGTATTGCGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCATGTGGAAATTCAAGCCACCACCAACAATAATCAGCAAATCAACAGAACTAGCCAAGATTATCCTTCTTTATCTACTCCTACCATGACTACCAGGCAGCCATACTTTGAATCTTCCATTTCTCTTGATAAGCTCGGCGTCAAAGCTGCAAATTTTGATTCCCTTGCTTCTGTTTCAAGGTGA 993 0.4481 MTPPSTVLYSLSLYLIFLNQHHFTTNYEVEQYNVDNGTVQQPISILEFRFHVICIYMGEFGVSDKEGANNSSNGGVGLGMTVQKQNLEAFPSKTMMMMMVPPPHNHHDPPLYGPFAAAGDCDGPTPCKSLTHYTNHFVNAASASGAALVRPLQPFHVSASTAFKSSGGVMSASLGFPFTQAQWKELERQAMVYKHMMASIPVPPHLLIPVPASRSPLDAGFNLRFSSSSDAEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKHVEIQATTNNNQQINRTSQDYPSLSTPTMTTRQPYFESSISLDKLGVKAANFDSLASVSR 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0161 330 Pfam QLQ 177 210 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele04g0161 330 ProSiteProfiles WRC domain profile. 230 274 IPR014977 -
Lele04g0161 330 PANTHER GROWTH-REGULATING FACTOR 5 156 297 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele04g0161 330 MobiDBLite consensus disorder prediction 278 300 - -
Lele04g0161 330 SMART QLQ_2 176 212 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele04g0161 330 ProSiteProfiles QLQ domain profile. 177 212 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele04g0161 330 Pfam WRC 231 273 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0161 Lele-ChrLele04 901616 904290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0161 168 294 GRF Transcription Factor Family AT5G53660 54.331 2.58e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele04g0161 WRC 1.4e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0165 03 881250 884527 Lele04g0161 04 901616 904290 ECH
Lele04g0161 04 901616 904290 Lele04g0161 04 901616 904290 ECH
Lele01g0157 01 904425 906805 Lele04g0161 04 901616 904290 hybridization
Lele02g0162 02 895840 898674 Lele04g0161 04 901616 904290 hybridization