Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0159 ATGGGGAAGGCAGGAGGAAGCTCGTGGTTGGCAACTGTGAGAAGGGTTTTCAGGTCTCCTGCCAAAGAAAAGGACAAGAAAATCAGCAGGACAAGAGAAGAGCATGGACAAGAGGAGGAAAAGCAGAAGAGGGGGAAAAGAAGATGGATGTTCAGAAACCCCTTTGGCCAAGAGACAACAACCCAGCATTGCGAAGAAAGAACCATAACAAGTGAAGCTGAAGTGACGGCGACAAGTTGTGACGCGGAGCAAAGGCATGCGATTGCAGTAGCCATGGCAACCACGGCAGCCGCTGAGGCAGCGTTAGCAACGGCTCAATCAGCAGTGGAGGTTGTTCGCCTTTCTACGCCTTCCTTCTTTGTCAGAGAACACAACGCAGCCATTGTAATCCAAACAGCTTTCAGAGGCTTTCTGGCCAGGAGAGCTCTTGGGGCACTTAAAGGATTAGTGAAGCTGCAAGCATTAGTGAGAGGTCATAACGTACGAAAACGAGCTAAAATAACACTGGAGTGCATGCAAGCTCTGGTTCGAGTTCAAACACGAGTATGCCAACAGCGAGCCAAGCGGCTCCCACAACATGAAAGAGCCACAGATTCCACAGACGAGAGTGGGACAGAGGAAGTGTGGATGCGCTGGGATGACCACCCACGAACGGTAGATAACCTTCGAGCTGTCCTGCAGAGAACAAAGGAAGCTGCCTTGAGACGTGAAATGTGCCTGGCTGATGCCTTCTCTCATCAGATATGGACAACTGGTAGAGAAGCATGCACCAGCGAGGAAGAGGTAGAAGACAGATACGGCCCCATGTGGAGGAGAAGGCATAGAGAGAACAGAGGCAGAGCTTCGTGTGATCGAAGAGACCCCATCAAAATAGTTGAAACCGATACACACAGTCCTCACTCTAAACCTGAGTTCGCTAAACCGCCAAGACTTTCATTTTCTAGGCCTAATAAAGCCCAATACGAGATGTCAATGGCAATGACACCACCACCAATGAAGATGAAGCATGTTGAGATGCATTCACCTAGTACTACTCCTCGTGCAAAGTCCAATACTTTGATGCCAAACTATATGGCGGCCACTGCATCCACGGGGGCTCGGTCTCGCTCACAAAGCACCCTCAGACACAGGGATTCAACCCCCGCGAAGGAAAAAATAGGATCCATTAAGAAACGCCTTTCATTCCCAGTTCCTAATTCTTGTGATGGTGTCGACACTTGA 1221 0.4971 MGKAGGSSWLATVRRVFRSPAKEKDKKISRTREEHGQEEEKQKRGKRRWMFRNPFGQETTTQHCEERTITSEAEVTATSCDAEQRHAIAVAMATTAAAEAALATAQSAVEVVRLSTPSFFVREHNAAIVIQTAFRGFLARRALGALKGLVKLQALVRGHNVRKRAKITLECMQALVRVQTRVCQQRAKRLPQHERATDSTDESGTEEVWMRWDDHPRTVDNLRAVLQRTKEAALRREMCLADAFSHQIWTTGREACTSEEEVEDRYGPMWRRRHRENRGRASCDRRDPIKIVETDTHSPHSKPEFAKPPRLSFSRPNKAQYEMSMAMTPPPMKMKHVEMHSPSTTPRAKSNTLMPNYMAATASTGARSRSQSTLRHRDSTPAKEKIGSIKKRLSFPVPNSCDGVDT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0159 406 MobiDBLite consensus disorder prediction 17 46 - -
Lele04g0159 406 SMART iq_5 145 166 IPR000048 GO:0005515
Lele04g0159 406 SMART iq_5 122 144 IPR000048 GO:0005515
Lele04g0159 406 Gene3D - 121 174 - -
Lele04g0159 406 PANTHER IQ-DOMAIN 5-RELATED 1 396 - -
Lele04g0159 406 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
Lele04g0159 406 MobiDBLite consensus disorder prediction 371 390 - -
Lele04g0159 406 MobiDBLite consensus disorder prediction 360 406 - -
Lele04g0159 406 MobiDBLite consensus disorder prediction 1 46 - -
Lele04g0159 406 MobiDBLite consensus disorder prediction 294 314 - -
Lele04g0159 406 Pfam Protein of unknown function (DUF4005) 335 402 IPR025064 -
Lele04g0159 406 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
Lele04g0159 406 Coils Coil 21 41 - -
Lele04g0159 406 Pfam IQ calmodulin-binding motif 150 166 IPR000048 GO:0005515
Lele04g0159 406 Pfam IQ calmodulin-binding motif 124 142 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0159 Lele-ChrLele04 898009 899497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0159 1 398 IQD Protein Family AT1G01110 35.537 6.26e-64 212