Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0149 ATGGGTGATTTGAAAGCAGTGGAAGCCAAGGAGAGCGAGAAGGAGAAGGAGAGAACAGAGGACGAGGAGGAAAGTGGAACAGAGAGTAAAGGGGGAGAATTGAGTGGTTTGATGAGGTGGGAGAAATTCTTGCCCAAGATGATATTGAGGGTTCTCTTGGTTGAATCCGATGATTCCACCCGACAGATTATCGCGGCGCTTCTCAGGAAATGCAGCTACAGAGTGGCTGCTGTTCCTGATGGCCTGAAAGCTTGGGAATTACTGAAGGGAAGATCACACAACATCGATCTAATACTGACAGAAGTAGATTTGCCTTCCATATCTGGCTATGCGCTTCTCACCTTAATTATGGAGCATGAGATTTGCAAAAGCATTCCTGTTATAATGATGTCCTCACAAGATTCGATTAGCACAGTATACAAGTGCATGTTGAAAGGTGCTGCTGACTATCTTGTTAAGCCCATTCGAAAAAATGAGCTGAGGAACTTGTGGCAGCATGTTTGGAGAAGGCGATCATCAGTAATCGGTTTAAATGGTCTTCAAGATGAGAGTGTTGCGCAACAGAAGGTTGAAGCCACTGCCGAAAATAATGCTGCTAGTCGTTCAAGTGGAGATGCCGCATGCATTCAAAAAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCCTGTACAAAGCCTGATTTGGAAGCTGAAAGTGCCCCTATGGAAAATGTTGAGGAATTTGCTCATTTAAGATGTGGTGACTCGAATCCGAGTGATGAAAAGATTCAGGAGGTTGAAGCTTGTATTCATTTAGGCCGCACATTGATTTTGCATGATAATCATGCTGGAGGATCAACTGTGGGTATCCACACAAATGGTAAGACGAGCACAACTCATGGCACGGATGGCTGTCCAGAGAATAGGAGTGCTAGTATAAGTGTGGAAGCTCATGATAATCACTGTGTTCAAATTAGCTCTTCCAAGGAAGCTATAGACTTGATTGGAGCATTTCATGCTAATTCAAAATGCAGTCCCAAAAGTTCCACAATCAATTGCACGGGCACGTTTGACTTCTCTCCACATTTAGATCTTTCCTTAAGAAGAGATCATCCCAGCAGCTTTGAGAATGAAGTCTCCAAAGATAGGCAAACCCTCATGCATTCCAACGCCTCAGCTTTCAAACGGTATACCAGCAGACAATTGCAAGCACCACCAGCTGGTCTCATTAACTTTTGTGATCCAGAAAGAGAACAGAGAAGAAATTGTGAGAAAAATAACTCTTATGTTGGTGCTGGCTATAACTCAGATAGTTCAACACCGAGTATGCAAAGAAGTATTGTGTCACCCACTACACCCCAAACTAGAGAATCTAAACTCGCAACTTCATTCTCACAGCAGCCGCGTCCTCTCCCGATTCCAGTTAGAGGAATAAGGTTCAGCGATCTATGCAGATCCTATGGCTCTGCCCCACCTCCAATGTTTTGTAGACAGTCAGATCCCCCATCAATGCCAAGTCCAAGATCTGCTGTGCACCTGGAATCTACCTTTCAAACCAATGCATATTGTCTGTCTAATGTCAAAGAAAATAGTTCGGAGCAGCTTTATGAAGCTCGAGGTCAAAGTGGAAACAACCTTGCAAGCCACATTGTTTATGTGCAGGATCACAAGTTGGAACATGTGGAAGATCGAGGACATATTTCTCCTTCAACTGATCAAAGTGGAAGCAGTAGTTTCTGCAATGGAAACTTGAGCCGCATGAACAGCATTGGCTACGGAAGCAACTGTGGAAGTAATAGTAACGTTGATCAGGCTGTCATAGTCAGGACTGCTTCAGAGGTAAAGAATGAAGACCTCACAAACAACGCAAATTCTTATCGATCCATCCAAAGAGAAGCAGCTCTAAACAAGTTTCGTTTGAAAAGGAAAGAGAGATGTTATGAGAAGAAGGTTCGGTATGAAAGCAGGAAGAAACTTGCAGAGCAGCGTCCCAGGGTGAAAGGACAATTTGTTCGTCAAGTGCAACCTGAACCTCAGGCTGCAGATAAAGATGGCTGA 2046 0.4379 MGDLKAVEAKESEKEKERTEDEEESGTESKGGELSGLMRWEKFLPKMILRVLLVESDDSTRQIIAALLRKCSYRVAAVPDGLKAWELLKGRSHNIDLILTEVDLPSISGYALLTLIMEHEICKSIPVIMMSSQDSISTVYKCMLKGAADYLVKPIRKNELRNLWQHVWRRRSSVIGLNGLQDESVAQQKVEATAENNAASRSSGDAACIQKNKELIEKGSDAQSSCTKPDLEAESAPMENVEEFAHLRCGDSNPSDEKIQEVEACIHLGRTLILHDNHAGGSTVGIHTNGKTSTTHGTDGCPENRSASISVEAHDNHCVQISSSKEAIDLIGAFHANSKCSPKSSTINCTGTFDFSPHLDLSLRRDHPSSFENEVSKDRQTLMHSNASAFKRYTSRQLQAPPAGLINFCDPEREQRRNCEKNNSYVGAGYNSDSSTPSMQRSIVSPTTPQTRESKLATSFSQQPRPLPIPVRGIRFSDLCRSYGSAPPPMFCRQSDPPSMPSPRSAVHLESTFQTNAYCLSNVKENSSEQLYEARGQSGNNLASHIVYVQDHKLEHVEDRGHISPSTDQSGSSSFCNGNLSRMNSIGYGSNCGSNSNVDQAVIVRTASEVKNEDLTNNANSYRSIQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVQPEPQAADKDG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0149 681 MobiDBLite consensus disorder prediction 1 33 - -
Lele04g0149 681 Pfam CCT motif 627 669 IPR010402 GO:0005515
Lele04g0149 681 ProSiteProfiles CCT domain profile. 627 669 IPR010402 GO:0005515
Lele04g0149 681 ProSiteProfiles Response regulatory domain profile. 50 168 IPR001789 GO:0000160
Lele04g0149 681 Coils Coil 4 24 - -
Lele04g0149 681 MobiDBLite consensus disorder prediction 1 29 - -
Lele04g0149 681 MobiDBLite consensus disorder prediction 653 681 - -
Lele04g0149 681 MobiDBLite consensus disorder prediction 422 452 - -
Lele04g0149 681 Gene3D - 47 264 - -
Lele04g0149 681 SMART REC_2 49 164 IPR001789 GO:0000160
Lele04g0149 681 PANTHER TWO-COMPONENT RESPONSE REGULATOR 50 233 IPR045279 GO:0009736
Lele04g0149 681 SUPERFAMILY CheY-like 49 181 IPR011006 -
Lele04g0149 681 Pfam Response regulator receiver domain 51 162 IPR001789 GO:0000160
Lele04g0149 681 CDD psREC_PRR 51 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0149 Lele-ChrLele04 841604 845775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0149 322 671 Response Regulator Gene Family AT5G24470 30.939 7.74e-28 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele04g0149 Response_reg 1e-21 CL0304