Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0139 ATGGGTGCGTTCCGCGAGGGTAGTCCGCCGCGCGTTGATGAGGTGGCAGTTTTGCCCCTGAATTTGCTTCCTCTAGGTTTCAGGTTTCGACCTACGGATGAGGAGCTGATCGATTACTATTTGCGCCAGAAGATCAACGGAAATGGGACTGACGTATGGGTTATTCGAGAAATTGATGTTTGCAAATGGGAGCCTTGGGATTTGCCTGATTTATCGGTTATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGATCGCAAATATCCTAATGGGCATCGATTGAACCGAGCAACGACTCATGGGTACTGGAAGGCAACGGGCAAAGATCGCAGAATTAAGTCTGGATCGAACTTGATTGGAATGAAGAAGACTTTAGTGTTCTATACTGGACGTGCACCCAGAGGGAAGAGGACCAATTGGGTTATGCACGAGTACCGTCCTACCCTTAAGGAGCTCGATGGTACCAATCCTGGGCAGAGCGCATATGTCCTTTGTCGTTTATTTAAGAAGCAAGATGAGACTCTTGAAGGTTCAAACTGTGAGGGAAATGACCGGACTGTGTCAACTCCAACTACTGCTTATTACTCTCCAGAAGAAATACAATCAGATGCTGTTCCAACGGCAGCTTCTCCATCACTAGCTACTGAAGATGATAAGAACAGGGCGGTTCCATTCTGTATCTCTGATAATTCTGATGACGCCACATCCAACATTATAACACCGATTGATTACAACAGCAAAGAATGTGATATTTGTGATGTACAAAATAAGATTGTTATTCCAACAACTGAAGAGGAAGATGAGCTCCTGAACTTTGACATATTTTATGATCCAACAACTGAACCATTGGATGGCAAACTCTTCTCTCCTGTACATCAGCATATCCCTCCAGAATTTTGTTTTACTTCAAGCAATGAATTGGATAATTGTGGGTTGCAACTTCAGTATGGTACAAATGAGGTTAATATGACTGAGTTTTTAAACTCAGTTGTCAACTGGGATGAGTTATCCTGTGATTCCAGCAGTCAAAAGCCCACTTCCACCTTGGTTGATGCTAAGGATAATGGATCAGGCAGTGATTCAGATGCGGAAAAGCCAAATATACTGAGTCTGCAAGCATTACATGCCGTGAATGATGGTGAGGCAATTGACACAACGTCTTCTTCAAGGTTGGAGAAAACTTCGGACTTCCACGGTACCATAAGCTCTGAGCTTAGTGGTGATGAGAAGAACCATATGGGATTATTACAAAACAATTTTCCAATGGCCTCACCTGATGCCGGCATGGGCCAAGTGCACCACGGGGACAATGGATCTGGAAATTATAATTCGGTTGTTAATGGTGATATTGGTACTGGAATCAGGATAAGGTCTCGCCAAGTACGGAATGACATGCCAAACACAAACAACCACAATAGCCGAGGTACTGCACCCAGGAGAATCCGTCTGCAACGTAAACTTCAAGTTCACCCTCTTAGCTCCAATGAGGTGGTCGATAGTGGGAGCTGCGTAACAGAGGACCATGATTCAAAGCCAAGCATTGCAGGGGAGAGAAAAGCTTCAGAAAATCACGCTGCTGATGTGGATGCTATCGAAGACGAATCCCAGAAGACATCTCCTGAGTCAACTGACATTACAAAGATTCCTGAGCAACATACTGAAAGCTTGTGCAGAAGGGCCCTTTACACATCAGAAGCGTCCATCAAACTCAAAATTTGGTCATCTGTTGTACTTGTTGTCATTGTACTGGTCCTGTTAGTAGTCTTAGCTAACATATGGGGGCATTCTAGAAGTTGA 1806 0.4446 MGAFREGSPPRVDEVAVLPLNLLPLGFRFRPTDEELIDYYLRQKINGNGTDVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRRIKSGSNLIGMKKTLVFYTGRAPRGKRTNWVMHEYRPTLKELDGTNPGQSAYVLCRLFKKQDETLEGSNCEGNDRTVSTPTTAYYSPEEIQSDAVPTAASPSLATEDDKNRAVPFCISDNSDDATSNIITPIDYNSKECDICDVQNKIVIPTTEEEDELLNFDIFYDPTTEPLDGKLFSPVHQHIPPEFCFTSSNELDNCGLQLQYGTNEVNMTEFLNSVVNWDELSCDSSSQKPTSTLVDAKDNGSGSDSDAEKPNILSLQALHAVNDGEAIDTTSSSRLEKTSDFHGTISSELSGDEKNHMGLLQNNFPMASPDAGMGQVHHGDNGSGNYNSVVNGDIGTGIRIRSRQVRNDMPNTNNHNSRGTAPRRIRLQRKLQVHPLSSNEVVDSGSCVTEDHDSKPSIAGERKASENHAADVDAIEDESQKTSPESTDITKIPEQHTESLCRRALYTSEASIKLKIWSSVVLVVIVLVLLVVLANIWGHSRS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0139 601 Gene3D NAC domain 32 178 IPR036093 GO:0003677|GO:0006355
Lele04g0139 601 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 259 - -
Lele04g0139 601 MobiDBLite consensus disorder prediction 505 543 - -
Lele04g0139 601 MobiDBLite consensus disorder prediction 492 548 - -
Lele04g0139 601 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Lele04g0139 601 FunFam Nac domain-containing protein 86 32 176 - -
Lele04g0139 601 SUPERFAMILY NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
Lele04g0139 601 MobiDBLite consensus disorder prediction 388 415 - -
Lele04g0139 601 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Lele04g0139 601 MobiDBLite consensus disorder prediction 344 367 - -
Lele04g0139 601 MobiDBLite consensus disorder prediction 388 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0139 Lele-ChrLele04 798809 802068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0139 15 515 NAC Transcription Factor Family AT4G35580 40.625 2.59e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele04g0139 NAM 4.1e-36 No_clan