Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0138 ATGCCCATTCTAACTTTTTGTCATTCTAAGTTGAGTCCTTCGGTAAATCTACAGTTACCTTGTAACTGCATGAGAAGAATGGGTTTGATTAAGCAAATAAAGTGTTCTGTTGCTAATAGAACACTGACTTCTAGCTCAGTGGCTTCACCCACATCCAAACCAGACTCCCATCGCTTGAACAGGAAACAAGGGCGTTCATCTTCATTATATAGTCGTCCTAGTTTATCAGAAATGAACAAAGAGATGATGGCAAACCGTGAGAAAGTTTATGCATTCTTGCGGGGGATTGGCATTGTTCCTGATGAGCTTGATGGCATGGAACTTCCAGTGACAGTCGAAGTTATGAGGGAACGGGTAGATTTTCTTCACAATCTAGGGCTTACAATTGAAGACATCAACAATTATCCATTAGTTCTTGGCTGCAGCGTCAAAAAGAATATGATTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTCAGGAAATCTACATTTACACAGTTCTTGCGGAGATACCCGCAAGTTCTTCATGCTAGTGTTGTTATTGACCTTGAGCCAGTGGTCAAGTATCTTCAGGGGATGGATATCAAGCCTAATGATATTCCCCGGGTTCTTGAAACATATCCAGAAGTGCTAGGGTTCAAGCTTGAGGGAACCATGAGCACATCAGTTGCTTATTTGGTTGGCATTGGTGTTGCAAGAAGAGAAATTGGAAGGGTTCTAACAAGATACCCTGAGATTTTGGGAATGAGAGTTGGTAGAGTAATCAAGCCTTTTGTGGAGTATCTGGAAGGCTTGGGAATTCCTAGATTAGCCCTTGCAAGAATAATAGAGAAGCGACCTTATATTCTTGGCTTTGGATTGGTCGAGAAGGTGAAGCCAAATGTTGAAGCTCTTGAAGATTTCAATATTAGAAGAGCACATCTACCCTCTGTAATTGCACAGTATCCTGATATCATGGGAATGGACTTGAAGCCAAAGCTTGAGAATCAAAGTAATTTACTTAAATCTTTACTTGATTTGGATTCTGAAGATTTTGGTAGAGTTGTTGAGAATATGCCACAGGTAATTAGCCTCAGTAGTGCGCCTATGTTAAAGCATGTTAATTTTCTCAAGGATTGTGGGTTTTCCTTGCAAAAAATGAAGAAGATGATTGCTGGATGCCCTCAACTTCTCGCTTTAAACATTGACATCATGAAACTTAGCTTTGATTACTTTCAAAAGGAGATGGGGAGGCCCTTGGAAGACTTGGTTGATTTCCCAGCCTTCTTCACATATGGTCTGGAGTCAACTGTAAAACCCAGGCATAAGATGGTTGCCAAGAAGGGAGTGAAGTGTTCCCTTGCATGGATGCTTAATTGCTCAGATGACAAGTTTGAGCAACGAATGGATTATGACACTATTGACATGGAGGAAATGGAAATGGGACCATCATTTGACATGAATTCGCTGATGGAACCAAGGAGTGACGAGTCAGCTTCTGATTATGATGACAGTGATGATGATGAGTAA 1509 0.4102 MPILTFCHSKLSPSVNLQLPCNCMRRMGLIKQIKCSVANRTLTSSSVASPTSKPDSHRLNRKQGRSSSLYSRPSLSEMNKEMMANREKVYAFLRGIGIVPDELDGMELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVVIDLEPVVKYLQGMDIKPNDIPRVLETYPEVLGFKLEGTMSTSVAYLVGIGVARREIGRVLTRYPEILGMRVGRVIKPFVEYLEGLGIPRLALARIIEKRPYILGFGLVEKVKPNVEALEDFNIRRAHLPSVIAQYPDIMGMDLKPKLENQSNLLKSLLDLDSEDFGRVVENMPQVISLSSAPMLKHVNFLKDCGFSLQKMKKMIAGCPQLLALNIDIMKLSFDYFQKEMGRPLEDLVDFPAFFTYGLESTVKPRHKMVAKKGVKCSLAWMLNCSDDKFEQRMDYDTIDMEEMEMGPSFDMNSLMEPRSDESASDYDDSDDDE 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0138 502 FunFam Transcription termination factor MTERF4, chloroplastic 253 467 - -
Lele04g0138 502 FunFam Transcription termination factor mterf4, chloroplastic 115 252 - -
Lele04g0138 502 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 SMART mt_12 66 99 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 SMART mt_12 381 412 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 SMART mt_12 346 376 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 MobiDBLite consensus disorder prediction 475 502 - -
Lele04g0138 502 MobiDBLite consensus disorder prediction 44 72 - -
Lele04g0138 502 Gene3D Transcription termination factor 3, mitochondrial 252 468 IPR038538 -
Lele04g0138 502 Gene3D Transcription termination factor 3, mitochondrial 66 180 IPR038538 -
Lele04g0138 502 Pfam mTERF 151 459 IPR003690 GO:0003690|GO:0006355
Lele04g0138 502 PANTHER CGI-12 PROTEIN-RELATED 150 282 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0138 Lele-ChrLele04 790267 791775 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele04g0138 mTERF 4.1e-108 No_clan