Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0122 ATGCTCACAAATAGAGACGTTTATGACATTGCAGCTCTTTGTACAGAGAATGAGAGGTTATTCTTCAAGGCATGTGGATTTGGAGGCGACATTTGTGAGCTCTACTACCATGATGTACACGAGGGCTACACCATCAATGACCCAGCAAGGCCGTGGCCCAGGAGGCTTGTGAATCAGGTAAGCCTCGTATCTGCTCATGGGCTTGGGCATTCACACTCGCTTTGGAAGCGTCAATGGTTTGCTGTTGAATGGATTGATCCTAACTGTAAATACTGTACCAAGATTAATGCTTCTGGGAGTGAAAATCCTGTTTGGGAAACCAAGTTTGCCATTCTGGTTGATGACTCTGAGTCAGAGATCAACATCCAAGATCTAGTGTTGAATGTGGAAGTTCATAGTATAGACCCCATATTCCTCACGGAAAAGATTCATGGCTCTGCGCCTGTTATCATCAAGGAGTTTCTAGCGAAGAAGGTTCCAAGTTCTGAGGTTTCTTTAAGGCCAGGAAACGAGGAAGTTCGGAGCTACCAATTACGCAAGAAGGATTCCGACAAACCACGGGGTTTCATTGACATTTCAATTCGTATTTTGGAGGAAAAGGAAGAGCAAAATTCGAACCCAGGTGTAAATTGGAGGGGTTTTCCGAAAGAAGAGAGGAAACTTGACAAGAGAAGATGGATTAGGGGAGAAGTATTGGCAGCATTTACCTCTGGCTTCACCCCACCACCAAAAGAATATGAAGCAGGGATGACCCTTCCCTGCCCCTATCCCATGCAATTCCCTATAAACGACTCAGACGCTGACCTAGATGAGGGGAGACCCAGTTACGAACGACGTAGGACTCCTTCTCCACCGCCACCACCTTCGAATGTTGGTTATATTCCCACTTTCCTACCCAGAAATGATTCTTTGCCATTGCCATCACCAACGTCTGGGTTGGCTATGGGAGCTCTCATATTTGGGGACGACTTCATGTCTGGTTTTGATGTTCCTTCCTTATGA 1002 0.4601 MLTNRDVYDIAALCTENERLFFKACGFGGDICELYYHDVHEGYTINDPARPWPRRLVNQVSLVSAHGLGHSHSLWKRQWFAVEWIDPNCKYCTKINASGSENPVWETKFAILVDDSESEINIQDLVLNVEVHSIDPIFLTEKIHGSAPVIIKEFLAKKVPSSEVSLRPGNEEVRSYQLRKKDSDKPRGFIDISIRILEEKEEQNSNPGVNWRGFPKEERKLDKRRWIRGEVLAAFTSGFTPPPKEYEAGMTLPCPYPMQFPINDSDADLDEGRPSYERRRTPSPPPPPSNVGYIPTFLPRNDSLPLPSPTSGLAMGALIFGDDFMSGFDVPSL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0122 333 ProSiteProfiles C2 domain profile. 39 164 IPR000008 -
Lele04g0122 333 MobiDBLite consensus disorder prediction 260 291 - -
Lele04g0122 333 PANTHER INGRESSION PROTEIN FIC1 60 251 - -
Lele04g0122 333 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 59 199 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0122 Lele-ChrLele04 711696 715102 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0122 04 711696 715102 Lele25g1058 25 6836586 6842610 CCT
Lele04g0122 04 711696 715102 Lele26g1064 26 6880362 6883929 CCT
Lele04g0122 04 711696 715102 Lele27g1018 27 17817022 17822940 CCT
Lele04g0122 04 711696 715102 Lele28g1056 28 6855745 6860488 CCT
Lele01g0122 01 715418 716495 Lele04g0122 04 711696 715102 hybridization
Lele02g0121 02 712533 713697 Lele04g0122 04 711696 715102 hybridization