Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0108 ATGGCTACTCTTTGCCCCGAACATGTCTCTGCAAACAAGGAGAGTATCATCAGAGAGCTCGTTGAGGGCAAGGAGTGCGCTTCCCATCTCAAGCTTTTGTTTCAGAAGCCTTCTGGGGCTGACGGAACTCCCTCTGCCCAACAACTCGTCGCCAAAATTTTGAGATCCTTCAACCAGTGTATTTCCGTTCTGTCTTCCTTCGAAGCTGGCTGCGAGGTTGGTCAGATTTCGGCGATTTCCGGTCAGAGTGGGTCTCCCCACGGAACTTCTTCCTGCAATGGCCTGAGGCCGGACGAATGGGGCCAGAGCAGGAAGAGATCGCTGCCGCCTACAAAGGATCGGAGAGGCTGCTACAAGAGAAGGAGTTACTTTAGGTGCACTCGGAATCAAGATCAGGGTTGCAAGGCAATCAAACAGGTTCAGCGCATACAGGAGAATCCAGAAACGTTCCTAACGACTTACATTGGATTTCACACGTGCAAAGACAACCTCAAGGCTCCAGAAATGGTGGTCACAGATTCTGGCAACTGGGAATCATATCTGGTGCCGTCGGCGAACGATGATCAAAAGGCGCAAGGTCGTCCTCTGATCAGCTCATCGTCATCAACCCCAACCATAAAGCAAGAATATCCCAAGGAGGACACACCACTGATGAGTGAAATAACAGACAGCTTGGGGACTAATTTGTGGTCAGAGTTGAAGATCGACTTTGAGCTTTCGGAGCCCTTGAAGATGTCGACTGGATATAATGCAGATGCATTGTATTCATGCAGTGCCGCTGCTATGGATTTTGGAGCGGATCATCATCTCGGCTTTGATTGA 822 0.5 MATLCPEHVSANKESIIRELVEGKECASHLKLLFQKPSGADGTPSAQQLVAKILRSFNQCISVLSSFEAGCEVGQISAISGQSGSPHGTSSCNGLRPDEWGQSRKRSLPPTKDRRGCYKRRSYFRCTRNQDQGCKAIKQVQRIQENPETFLTTYIGFHTCKDNLKAPEMVVTDSGNWESYLVPSANDDQKAQGRPLISSSSSTPTIKQEYPKEDTPLMSEITDSLGTNLWSELKIDFELSEPLKMSTGYNADALYSCSAAAMDFGADHHLGFD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0108 273 ProSiteProfiles WRKY domain profile. 112 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g0108 273 MobiDBLite consensus disorder prediction 80 115 - -
Lele04g0108 273 SMART WRKY_cls 112 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g0108 273 MobiDBLite consensus disorder prediction 99 115 - -
Lele04g0108 273 SUPERFAMILY WRKY DNA-binding domain 113 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g0108 273 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 189 IPR044810 GO:0003700
Lele04g0108 273 MobiDBLite consensus disorder prediction 80 97 - -
Lele04g0108 273 MobiDBLite consensus disorder prediction 186 205 - -
Lele04g0108 273 Pfam WRKY DNA -binding domain 115 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g0108 273 Gene3D WRKY domain 93 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0108 Lele-ChrLele04 632708 634432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0108 11 203 WRKY Transcription Factor Family AT3G56400 33.476 2.22e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele04g0108 WRKY 3.2e-11 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0449 26 2828616 2834154 Lele04g0108 04 632708 634432 CCT
Lele27g1646 27 21976384 21981438 Lele04g0108 04 632708 634432 CCT
Lele28g0444 28 2811732 2817195 Lele04g0108 04 632708 634432 CCT
Lele01g0111 01 663967 665736 Lele04g0108 04 632708 634432 hybridization