Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele04g0108 | ATGGCTACTCTTTGCCCCGAACATGTCTCTGCAAACAAGGAGAGTATCATCAGAGAGCTCGTTGAGGGCAAGGAGTGCGCTTCCCATCTCAAGCTTTTGTTTCAGAAGCCTTCTGGGGCTGACGGAACTCCCTCTGCCCAACAACTCGTCGCCAAAATTTTGAGATCCTTCAACCAGTGTATTTCCGTTCTGTCTTCCTTCGAAGCTGGCTGCGAGGTTGGTCAGATTTCGGCGATTTCCGGTCAGAGTGGGTCTCCCCACGGAACTTCTTCCTGCAATGGCCTGAGGCCGGACGAATGGGGCCAGAGCAGGAAGAGATCGCTGCCGCCTACAAAGGATCGGAGAGGCTGCTACAAGAGAAGGAGTTACTTTAGGTGCACTCGGAATCAAGATCAGGGTTGCAAGGCAATCAAACAGGTTCAGCGCATACAGGAGAATCCAGAAACGTTCCTAACGACTTACATTGGATTTCACACGTGCAAAGACAACCTCAAGGCTCCAGAAATGGTGGTCACAGATTCTGGCAACTGGGAATCATATCTGGTGCCGTCGGCGAACGATGATCAAAAGGCGCAAGGTCGTCCTCTGATCAGCTCATCGTCATCAACCCCAACCATAAAGCAAGAATATCCCAAGGAGGACACACCACTGATGAGTGAAATAACAGACAGCTTGGGGACTAATTTGTGGTCAGAGTTGAAGATCGACTTTGAGCTTTCGGAGCCCTTGAAGATGTCGACTGGATATAATGCAGATGCATTGTATTCATGCAGTGCCGCTGCTATGGATTTTGGAGCGGATCATCATCTCGGCTTTGATTGA | 822 | 0.5 | MATLCPEHVSANKESIIRELVEGKECASHLKLLFQKPSGADGTPSAQQLVAKILRSFNQCISVLSSFEAGCEVGQISAISGQSGSPHGTSSCNGLRPDEWGQSRKRSLPPTKDRRGCYKRRSYFRCTRNQDQGCKAIKQVQRIQENPETFLTTYIGFHTCKDNLKAPEMVVTDSGNWESYLVPSANDDQKAQGRPLISSSSSTPTIKQEYPKEDTPLMSEITDSLGTNLWSELKIDFELSEPLKMSTGYNADALYSCSAAAMDFGADHHLGFD | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele04g0108 | 273 | ProSiteProfiles | WRKY domain profile. | 112 | 158 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele04g0108 | 273 | MobiDBLite | consensus disorder prediction | 80 | 115 | - | - | |
Lele04g0108 | 273 | SMART | WRKY_cls | 112 | 162 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele04g0108 | 273 | MobiDBLite | consensus disorder prediction | 99 | 115 | - | - | |
Lele04g0108 | 273 | SUPERFAMILY | WRKY DNA-binding domain | 113 | 161 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele04g0108 | 273 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 20 | 189 | IPR044810 | GO:0003700 | |
Lele04g0108 | 273 | MobiDBLite | consensus disorder prediction | 80 | 97 | - | - | |
Lele04g0108 | 273 | MobiDBLite | consensus disorder prediction | 186 | 205 | - | - | |
Lele04g0108 | 273 | Pfam | WRKY DNA -binding domain | 115 | 161 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele04g0108 | 273 | Gene3D | WRKY domain | 93 | 162 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele04g0108 | Lele-ChrLele04 | 632708 | 634432 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele04g0108 | 11 | 203 | WRKY Transcription Factor Family | AT3G56400 | 33.476 | 2.22e-28 | 108 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lele04g0108 | WRKY | 3.2e-11 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele26g0449 | 26 | 2828616 | 2834154 | Lele04g0108 | 04 | 632708 | 634432 | CCT | |
Lele27g1646 | 27 | 21976384 | 21981438 | Lele04g0108 | 04 | 632708 | 634432 | CCT | |
Lele28g0444 | 28 | 2811732 | 2817195 | Lele04g0108 | 04 | 632708 | 634432 | CCT | |
Lele01g0111 | 01 | 663967 | 665736 | Lele04g0108 | 04 | 632708 | 634432 | hybridization |