Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0107 ATGGCAAACCCCAGAAATCTGAAAGAGCCAGAAACCATGGAAGAAGCCACTGGTTCTTTAATAGAGCGTGCTTGTGAATTAGCCAAACACCTGGAATCAAATTTTCCCAACTTGGCTAACCAACCCGATACACTGTTCACGTCCATTGATGAGATAGTGAAGACGTTCTTGGCCGCAAAAGAAAACCTAAGAACGTTTTCCCAATACCCAAGACCACCTTCTTCTTCCTTTGCTCATCAGTCGATCAGATCTACCAGTCATGCACAGCCAATGGATCAGTCAATTCGTGATCAGATGCAAAGACCACGATCAGCTCAAATGCGACTGGGAAAGAGGAAAGGTGATACGGAGACGAAGACGGTGATGGCACCGGCGCCTAGGTTTGGGAACACAGAGATTCCACCAGAAGATGGTTTCACTTGGCGAAAGTATGGCCAGAAAGAGATATTTGGCTCTAACTACCCAAGGAGTTATTACAGGTGCACCCACCAGAAATTATATAAATGTCCGGCGAAGAAGCAAGTACAGCGACTTGATAACAACCCTAACACATTCGCAGTAACATACCGAGGCAGTCACAGCTGCATTATGTCCTCCACGGCTCCATCCTCAGTTCCACCTCCACACCTTTTCGCTGACTTCAACACCACCGTTTCGCCTCAGCTGTCTTCTTCTTCAACTCCAGTTTCCCGGTGGCTCCCGTCGCTCCACCTCGACCTCTGCACCGCAGCTCCGACTGTTGTGGATGCCTGTAGTGCCAGTGGAGGCCCCTCCACTTCGAGGTACGGTGGTGGTAGTACGAATTATATGGTGGCAGATATAGCTGATGCTATATTCAATTCTAGTAGGAGTAGCGCCAACGAATCCCTCTTCCCGTTTCCTGAAGATAAATGGGAACTTGGTGGCTAG 909 0.4873 MANPRNLKEPETMEEATGSLIERACELAKHLESNFPNLANQPDTLFTSIDEIVKTFLAAKENLRTFSQYPRPPSSSFAHQSIRSTSHAQPMDQSIRDQMQRPRSAQMRLGKRKGDTETKTVMAPAPRFGNTEIPPEDGFTWRKYGQKEIFGSNYPRSYYRCTHQKLYKCPAKKQVQRLDNNPNTFAVTYRGSHSCIMSSTAPSSVPPPHLFADFNTTVSPQLSSSSTPVSRWLPSLHLDLCTAAPTVVDACSASGGPSTSRYGGGSTNYMVADIADAIFNSSRSSANESLFPFPEDKWELGG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0107 302 MobiDBLite consensus disorder prediction 67 101 - -
Lele04g0107 302 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 206 IPR044810 GO:0003700
Lele04g0107 302 Pfam WRKY DNA -binding domain 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g0107 302 MobiDBLite consensus disorder prediction 67 120 - -
Lele04g0107 302 Gene3D WRKY domain 127 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g0107 302 ProSiteProfiles WRKY domain profile. 136 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g0107 302 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g0107 302 SUPERFAMILY WRKY DNA-binding domain 133 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0107 Lele-ChrLele04 628409 630421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0107 13 260 WRKY Transcription Factor Family AT2G40740 36.897 7.42e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele04g0107 WRKY 6.5e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0110 01 659704 661595 Lele04g0107 04 628409 630421 hybridization
Lele02g0109 02 625787 627667 Lele04g0107 04 628409 630421 hybridization