Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0105 ATGGATAATGTAAGAAACCCGCCAAAGGGTATAAGAGAAGCAAGGGAGATCGAGATTTCGGCATGTGTGATGTTTTTTCAAGGGGAATATGGGAAATGGATTGGCAGAAAAGGGGGCGAGATGTCATCAAAGAAACGCATGGCTTCTAGGATATCAGGCTCTTGTTCTTCTTCGGATTGGATGAGGGAAAACGGTGATGTTCCTCACGTTTTAGCTGTTGACGACAATGTCATTGATCGCAAACTTGTCGAGAAGCTTCTCAGGAACTCTTCTTGCAAAGTGACAACCGCAGAAAATGGGGCGAGGGCACTGGAATTCTTGGGTCTGGCAACTGATGAAGGCAACGTCAAGAAGGGCACTAGATCCAGAGTAAATTTGGTGATAACAGACTATTGTATGCCTGGGATGACGGGGTATGATCTGCTTAAGAAGATCAAGGAATCGTCTTTCACGAAGGAGGTTCCGGTGGTCATCATGTCATCTGAGAATGTGCCAACTCGGATTAACAAATGTTTGGAGGAAGGAGCTCAGATGTTCATCCTAAAACCCCTTAAACAATCTGATGTTAATATACTGACGTGTCAATTGATGAACTGCAAAGGCCAAACTTTTCCGTAG 618 0.445 MDNVRNPPKGIREAREIEISACVMFFQGEYGKWIGRKGGEMSSKKRMASRISGSCSSSDWMRENGDVPHVLAVDDNVIDRKLVEKLLRNSSCKVTTAENGARALEFLGLATDEGNVKKGTRSRVNLVITDYCMPGMTGYDLLKKIKESSFTKEVPVVIMSSENVPTRINKCLEEGAQMFILKPLKQSDVNILTCQLMNCKGQTFP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0105 205 Pfam Response regulator receiver domain 70 188 IPR001789 GO:0000160
Lele04g0105 205 PANTHER TWO-COMPONENT RESPONSE REGULATOR 68 196 IPR045279 GO:0009736
Lele04g0105 205 Gene3D - 69 198 - -
Lele04g0105 205 ProSiteProfiles Response regulatory domain profile. 69 197 IPR001789 GO:0000160
Lele04g0105 205 SUPERFAMILY CheY-like 68 195 IPR011006 -
Lele04g0105 205 SMART REC_2 68 193 IPR001789 GO:0000160
Lele04g0105 205 CDD REC_typeA_ARR 70 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0105 Lele-ChrLele04 617923 620829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0105 52 200 Response Regulator Gene Family AT3G56380 65.333 2.83e-61 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele04g0105 Response_reg 8.5e-22 CL0304