Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0099 ATGGCTATCTCACCATTCTCTGCCATCTCTCTTGTTTTCTTTCTTCTTCATCTTCCCAGCTCTTTTGGTGACTATGGAGGCTGGCAAAGTGGCCACGCCACATTTTATGGTGGGGGTGACGCATCCGGCACAATGGGGGGTGCTTGTGGGTATGGCAATTTGTACAGCCAAGGTTACGGGACAAACACGGCGGCACTGAGCACGGCTCTATTCAACAATGGCCTCAGCTGTGGGTCTTGCTACGAGATGCGATGCGACAAGGACCCCAAATGGTGCCTTCCCGGCGTCATCACCGTCACCGCCACCAACTTCTGTCCTCCTAACTTTGGTTTGTCCAATGACAATGGCGGGTGGTGCAACCCTCCTCTGCAGCACTTTGATCTCGCAGAGCCTGCTTTCTTAAAGATCGCTCAATACAAAGCTGGCATTGTTCCCGTTTCTTTCAGAAGAGTGCCGTGTGTGAAGAAGGGAGGGATCAGATTCACGATCAACGGGCATTCGTATTTCAACTTGGTTCTGATTTCAAATGTGGGAGGAGCAGGGGATGTACACGCGGTTTCCATCAAGGGGTCAAGGACAGGGTGGCAATCAATGTCAAGAAACTGGGGACAGAACTGGCAGAGCAACTCGTACCTGAATGGGCAGAGCCTCTCGTTCAAGGTCACCGCTAGTGATGGCAGAACCGTCACCAGCAACACCGTTGTACCTGCTAATTGGCAATTTGGTCAGACCTTCGAGGGTGGCCAATTCTAG 753 0.5206 MAISPFSAISLVFFLLHLPSSFGDYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMRCDKDPKWCLPGVITVTATNFCPPNFGLSNDNGGWCNPPLQHFDLAEPAFLKIAQYKAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSRTGWQSMSRNWGQNWQSNSYLNGQSLSFKVTASDGRTVTSNTVVPANWQFGQTFEGGQF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0099 250 Gene3D - 157 250 IPR036749 -
Lele04g0099 250 PRINTS Expansin/Lol pI family signature 195 209 IPR007118 GO:0005576
Lele04g0099 250 PRINTS Expansin/Lol pI family signature 141 157 IPR007118 GO:0005576
Lele04g0099 250 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Lele04g0099 250 PRINTS Expansin/Lol pI family signature 233 247 IPR007118 GO:0005576
Lele04g0099 250 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Lele04g0099 250 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Lele04g0099 250 Pfam Expansin C-terminal domain 159 236 IPR007117 -
Lele04g0099 250 SMART dpbb_1 63 148 IPR007112 -
Lele04g0099 250 Pfam Lytic transglycolase 63 148 IPR009009 -
Lele04g0099 250 Gene3D - 18 153 IPR036908 -
Lele04g0099 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 158 IPR007112 -
Lele04g0099 250 PRINTS Expansin signature 116 133 IPR002963 GO:0009664
Lele04g0099 250 PRINTS Expansin signature 97 107 IPR002963 GO:0009664
Lele04g0099 250 PRINTS Expansin signature 157 169 IPR002963 GO:0009664
Lele04g0099 250 PRINTS Expansin signature 233 249 IPR002963 GO:0009664
Lele04g0099 250 PRINTS Expansin signature 133 146 IPR002963 GO:0009664
Lele04g0099 250 PRINTS Expansin signature 58 72 IPR002963 GO:0009664
Lele04g0099 250 PRINTS Expansin signature 169 190 IPR002963 GO:0009664
Lele04g0099 250 PRINTS Expansin signature 85 96 IPR002963 GO:0009664
Lele04g0099 250 PRINTS Expansin signature 204 225 IPR002963 GO:0009664
Lele04g0099 250 SUPERFAMILY Barwin-like endoglucanases 13 176 IPR036908 -
Lele04g0099 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 168 247 IPR007117 -
Lele04g0099 250 FunFam Expansin 158 250 - -
Lele04g0099 250 FunFam Expansin 17 154 - -
Lele04g0099 250 PANTHER EXPANSIN-A15 10 250 IPR002963 GO:0009664
Lele04g0099 250 SUPERFAMILY PHL pollen allergen 155 247 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0099 Lele-ChrLele04 600246 601327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0099 6 250 Expansin Gene Family AT2G40610 82.114 2.99e-151 420