Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0097 ATGAAGACTTTTAAGAGAAGGAACGGTGGTCGCAACAAGCATGGCCGTGGACACGTTAAATTCATTCGCTGCTCCAACTGTGGCAAATGTTGCCCCAAGGACAAGTCAATTAAAAGGTTTCTTGTGAGGAACATTGTTGAGCAAGCTGCTGTTAGGGATGTCCAGGAAGCCTGTGTATATGAGCAATACACCCTTCCCAAGCTGTATGTTAAGATGCAATATTGTGTGTCCTGCGCAATTCACTCCCATGTTGTGAGGGTTCGATCTCGCACAAACAGGAGGAACCGTGAACCCCCACAGCGCTTCATCAGGCGCAGGGATGATCAACCAAGGCCTGGTCAGCCAGGGCAAGCACCTCGTCCTGCTGGAGTAGGAGCTCCTGCCCGTGCCTAA 393 0.5089 MKTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTNRRNREPPQRFIRRRDDQPRPGQPGQAPRPAGVGAPARA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0097 130 FunFam 40S ribosomal protein S26 2 115 - -
Lele04g0097 130 Pfam Ribosomal protein S26e 3 107 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele04g0097 130 MobiDBLite consensus disorder prediction 91 111 - -
Lele04g0097 130 MobiDBLite consensus disorder prediction 87 130 - -
Lele04g0097 130 Gene3D Ribosomal protein S26e 2 115 IPR038551 -
Lele04g0097 130 PANTHER 40S RIBOSOMAL PROTEIN S26 3 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele04g0097 130 ProSitePatterns Ribosomal protein S26e signature. 74 81 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0097 Lele-ChrLele04 587621 589705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0097 3 117 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.348 1.18e-68 201