Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0093 ATGTGTATTCGAATTGGAGGCAGCCGAGAAAGGCGTGGTGTATCCAAGGGAGCTAAATCCATGGCTTCTCGCTACTTCTACTCGCTGCTGTTACTGGCTCTCGTCTCCCAAGCGGTGGCCGCAAAGCTGAGTCCGGACTTCTACTCCTGCAGCTGTCCCAAACTGCTGCCCATCGTCAAGAAAGGCGTCGCCGAAGCCATCAAGAATGAAGCTCGCATGGGAGCCTCCTTGCTTCGACTGCATTTCCATGACTGCTTTGTCAACGGGTGTGATGCCTCCATACTGCTGGATGATACCGGCAACTTCATAGGAGAGAAGACGGCGGCGGCCAACAACCGTTCAGCAAGAGGATTCAACGTCATCGATGACATCAAAGCCGAGGTGGAGAAAGCATGTCCCGGAGTGGTGTCCTGTGCCGATATTCTTACTCTCGCCGCCCGTGACTCTGTCCTTCAGTTAGGGGGGCCTTCCTGGGAAGTGCCTCTGGGAAGAAGAGACTCGACCACCGCCAGCAGACTCGCAGCCAACAACTCCATTCCGGCCCCCTTTTTAAGTCTGACCGCTCTTAAATCCAATTTCGCCAGCCACGGTCTCTCTGTCAAGGACTTGGTCGCTCTTTCAGGTGCGCATACTATTGGGCTGGCCAGATGCGTGCAATTCCGAGCGCACATCTACAACGACTCCAATATTGATGCCTCCTTTGCCAAGTCACTGCAGAGCAAGTGCCCGAGAAGCGGCAATGATGATGTGCACGCACCCCTTGACTTCCAGACTCCCACCCATTTTGATAATCTCTATTTCAAGCATTTGCCCCTGAAGAAGGCTCTTCTCCATTCCGACCAGGAGCTCTTCAAAGGCAGTTCTTCCACCGACAAATTGGTCACCAAGTATGCCTCCAACAGTGATTCCTTCTTCAAGGACTTTGCCAAGGCCATGATCAGAATGGGCAAAATCAAACCCCTCACTGGAACCAAGGGCCAGATCAGAATCAATTGCAGAAAAGTCAATTAA 1011 0.5262 MCIRIGGSRERRGVSKGAKSMASRYFYSLLLLALVSQAVAAKLSPDFYSCSCPKLLPIVKKGVAEAIKNEARMGASLLRLHFHDCFVNGCDASILLDDTGNFIGEKTAAANNRSARGFNVIDDIKAEVEKACPGVVSCADILTLAARDSVLQLGGPSWEVPLGRRDSTTASRLAANNSIPAPFLSLTALKSNFASHGLSVKDLVALSGAHTIGLARCVQFRAHIYNDSNIDASFAKSLQSKCPRSGNDDVHAPLDFQTPTHFDNLYFKHLPLKKALLHSDQELFKGSSSTDKLVTKYASNSDSFFKDFAKAMIRMGKIKPLTGTKGQIRINCRKVN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0093 336 CDD secretory_peroxidase 42 335 IPR033905 GO:0004601|GO:0042744
Lele04g0093 336 FunFam Peroxidase 180 315 - -
Lele04g0093 336 Pfam Peroxidase 59 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PANTHER PEROXIDASE 72-RELATED 38 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 FunFam Peroxidase 46 188 - -
Lele04g0093 336 Gene3D Peroxidase, domain 2 180 315 - -
Lele04g0093 336 Gene3D - 46 336 - -
Lele04g0093 336 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Lele04g0093 336 ProSiteProfiles Plant heme peroxidase family profile. 42 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele04g0093 336 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Lele04g0093 336 SUPERFAMILY Heme-dependent peroxidases 43 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0093 Lele-ChrLele04 550070 551578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0093 39 336 Peroxidase AT5G05340 61.333 4.07e-131 375