Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0091 ATGGTTTCTAAAGAGCACAGCCACAAGAGAGCAGTACTGAATGAGAAGTTTCAACTCCTTCGTTCTATTACTAACTCTCATGCTCTAAATCGATCCGCGATCATAACGGATGCGTCGAAGTACATCGCAGAGCTAAAGCAGAAAGTGGAGAGAGTAAATGAAGACATAGCCGCCACTGCACAGACTTCAAGTGACCAGAATCCCTTGCCAACGGTGACAGTGGAAACCCTGGAAAAGGGATTTCTTGTAGATGTACTTGTAGCCAAGAGTTGCCCGGGTCTGCTTGTATCCGTATTGGAAGCGTTTGAAGGGATGGGTCTGAATGTGCTGGAAGCTAGGGTTTCTTGTAAAGACACATTTCGATTTCAAGCAGTTGGAGGAGAAGAAGGAGAAGGCGTGAATATGGATGCACAAGCAGTGAAACAGGCAGTGGGACAGGCGATAGAGAAATGGAGAGAAAGCACTAGCGATGAACAGTAG 480 0.4646 MVSKEHSHKRAVLNEKFQLLRSITNSHALNRSAIITDASKYIAELKQKVERVNEDIAATAQTSSDQNPLPTVTVETLEKGFLVDVLVAKSCPGLLVSVLEAFEGMGLNVLEARVSCKDTFRFQAVGGEEGEGVNMDAQAVKQAVGQAIEKWRESTSDEQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0091 159 CDD ACT_UUR-ACR-like 92 148 - -
Lele04g0091 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 57 IPR036638 GO:0046983
Lele04g0091 159 Gene3D - 7 69 IPR036638 GO:0046983
Lele04g0091 159 Coils Coil 35 62 - -
Lele04g0091 159 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 8 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0091 Lele-ChrLele04 544296 545518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0091 13 144 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.730 2.41e-10 55.8