Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0083 ATGGGTGTTTATGATCAAGGTTCTAATATCACTTCTTTACCTTTGGATTCTTCTAGGAAGAGGAAAAGTCGTAGTAGGCGGGATGGTTCTAAATCTGTGGCTGAGACTCTTGCAAAGTGGAAAGAATATAATGGATATCTCGAATCTAGCAAAGGTGAGAGCAAACCAACTCGCAGAGCCCCGGCCAAAGGTTCAAAGAAAGGATGTATGAAGGGTAAAGGTGGGCCTGACAACTCAAGATGTAACTACAGAGGCGTGAGACAAAGAACCTGGGGAAAATGGGTTGCTGAGATTAGGGAACCAAACCGAGGAAGTAGGCTGTGGTTGGGTACATTTGCTACTGCCTATGAAGCTGCTCTTGCTTATGATGAAGCTGCTAGAGCCATGTACGGTCCTTGTGCCCGCCTCAATTTTCCCTACATATCGGATTATACTTCTTGCAAGGACTCCTCACCGGCTACAACTTTATCAAGTTCTTCTGTGGCAACTCCTGCTGGTTCGGACACAACAACCATATCAAATCATTCCGAGGTCTGTGCGGCTGAGGATGTTAATTCAAGGCATCAACCTACCAAAATCAATGATATGGATTATGTTCATCTTGAATCTGATGAAGTCGCCTCTGCAAATATCAAAGTGAAGTCGGAACCAAAAGATGCGCCAGTCGATCTCGCAGATCACGAGTGCAGGGGTTGTCAAATTGTGAAACCGCAAGAATCCGACATTAAAAAGGATGGCAGTGATGAAAGTAAAGATCAAATGGACTATTCTTGGCTTGAGGGTAGTGACCTGGAAGGTGATTACTTGCAGAATTTCTCTATGGATGAGATGTTTGATGTGGATGAACTTTTGGGGGCTATGGACAAGGATCCAGTTGGTGACTTTGAAACGTTCGGTTTTGGTCAAATGGGCCACGCTGGAGATGGAAACCTTAAGAGTGAAATGCCATCAAGCTTTTCCTATGAACTGCAAAACCCAGATGCCAAGCTGCTGGGAAGTCTTAATCACATGGAGCAGACACCATCAGATGTTGATTATGGATTTGATTTTTTGAAAATAGAGGAGACAGCGAACAGTAATGGTAGAGGGGATGAACAGCAATTTCTTGATTTTGAATTACCAGATCTGTGA 1131 0.4394 MGVYDQGSNITSLPLDSSRKRKSRSRRDGSKSVAETLAKWKEYNGYLESSKGESKPTRRAPAKGSKKGCMKGKGGPDNSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFATAYEAALAYDEAARAMYGPCARLNFPYISDYTSCKDSSPATTLSSSSVATPAGSDTTTISNHSEVCAAEDVNSRHQPTKINDMDYVHLESDEVASANIKVKSEPKDAPVDLADHECRGCQIVKPQESDIKKDGSDESKDQMDYSWLEGSDLEGDYLQNFSMDEMFDVDELLGAMDKDPVGDFETFGFGQMGHAGDGNLKSEMPSSFSYELQNPDAKLLGSLNHMEQTPSDVDYGFDFLKIEETANSNGRGDEQQFLDFELPDL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0083 376 MobiDBLite consensus disorder prediction 1 33 - -
Lele04g0083 376 FunFam Ethylene-responsive transcription factor 2 81 140 - -
Lele04g0083 376 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Lele04g0083 376 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 18 348 - -
Lele04g0083 376 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Lele04g0083 376 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Lele04g0083 376 Gene3D AP2/ERF domain 82 140 IPR036955 GO:0003700|GO:0006355
Lele04g0083 376 MobiDBLite consensus disorder prediction 48 81 - -
Lele04g0083 376 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Lele04g0083 376 CDD AP2 81 140 IPR001471 GO:0003700|GO:0006355
Lele04g0083 376 MobiDBLite consensus disorder prediction 17 33 - -
Lele04g0083 376 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Lele04g0083 376 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Lele04g0083 376 MobiDBLite consensus disorder prediction 153 173 - -
Lele04g0083 376 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0083 Lele-ChrLele04 486301 487431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0083 19 376 AP2-EREBP Transcription Factor Family AT2G40340 42.623 4.28e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele04g0083 AP2 1.6e-14 CL0081