Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0067 ATGGCGGACTTTTCTTCCTCGCCTCCTCATGTGCTTCACCCTCCCCAAGAAACCGCAACCGCCACCGTCACCACCGCCACTCCCTGCCCAACATATTCTAATACCTCCAAAACTGACTCTGCTCGCAAATGTAAAGGCAAGGGTGGTCCCGACAACAACAAATTTAGGTACCGTGGTGTGAGGCAACGAAGCTGGGGCAAATGGGTCGCTGAGATCCGAGAGCCTCGCAAGCGAACCCGAAAGTGGCTCGGCACCTTCGCCACCGCCGAGGACGCCGCTCGAGCCTACGACCGCGCCGCTATCATCCTCTACGGCTCTAGGGCCCAGCTCAATTTACAACCCTCCGCCGCCCCCTCTTCCCACTCTTCCTCCTCTCGGGCCTCTACCCCTTCCTCCTCTTCTCAAACCCTTCGTCCCTTGCTTCCCCGCCCCTCTGGCCTTAGCTTCGCCTTTTCTTCTGCCGCCACATCGGATTTCTGGCCCTACGGGGTTTACCCCGGCAATAATACTAATACTGATTATATCCCGCAAATGATGTGCCCGGTGAATAATAATAATACGGTGCAACAACATCGTCAAGTGGCGCATCTTCCACAGAAACCGTGTCAGTTCCCAGAATCTGGTAGAAATATTGTCGACAACTCCAACATAGCAACCTCGTACCAGGATCAGCTGCTTCTGCAGCAGCCTCAGTCGAATCAACGGCAGCATCATAATTGCATGCACGATGATATTATTTCTCTGGTGAGTTCGATTGGGTCAAGTTCGCAGGCACAGACTGTGGTTGCACCTGCGGATCCGTGGCCGTGGACGAATGAGGAAGAGTACCCAACAAGTCTATGGGACTACTATAACGATCCTTTCCTCTTTGATTTTTAA 879 0.5347 MADFSSSPPHVLHPPQETATATVTTATPCPTYSNTSKTDSARKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSAAPSSHSSSSRASTPSSSSQTLRPLLPRPSGLSFAFSSAATSDFWPYGVYPGNNTNTDYIPQMMCPVNNNNTVQQHRQVAHLPQKPCQFPESGRNIVDNSNIATSYQDQLLLQQPQSNQRQHHNCMHDDIISLVSSIGSSSQAQTVVAPADPWPWTNEEEYPTSLWDYYNDPFLFDF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0067 292 MobiDBLite consensus disorder prediction 11 39 - -
Lele04g0067 292 SMART rav1_2 56 119 IPR001471 GO:0003700|GO:0006355
Lele04g0067 292 FunFam Ethylene-responsive transcription factor 2 56 114 - -
Lele04g0067 292 CDD AP2 56 113 IPR001471 GO:0003700|GO:0006355
Lele04g0067 292 MobiDBLite consensus disorder prediction 113 139 - -
Lele04g0067 292 Pfam AP2 domain 56 104 IPR001471 GO:0003700|GO:0006355
Lele04g0067 292 MobiDBLite consensus disorder prediction 40 56 - -
Lele04g0067 292 PRINTS Ethylene responsive element binding protein signature 57 68 IPR001471 GO:0003700|GO:0006355
Lele04g0067 292 PRINTS Ethylene responsive element binding protein signature 79 95 IPR001471 GO:0003700|GO:0006355
Lele04g0067 292 SUPERFAMILY DNA-binding domain 56 114 IPR016177 GO:0003677
Lele04g0067 292 MobiDBLite consensus disorder prediction 1 56 - -
Lele04g0067 292 ProSiteProfiles AP2/ERF domain profile. 56 113 IPR001471 GO:0003700|GO:0006355
Lele04g0067 292 Gene3D AP2/ERF domain 55 113 IPR036955 GO:0003700|GO:0006355
Lele04g0067 292 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 33 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0067 Lele-ChrLele04 406679 407557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0067 42 292 AP2-EREBP Transcription Factor Family AT2G40220 45.734 2.95e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele04g0067 AP2 9.8e-13 CL0081