Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0057 ATGGCCGTCTCCGACGTTGGAGCTGTCCTAGAATTCTTGAGGAACAATGGCTTCACAGAGGCAGAGTCCGCCCTCAAAGAGGACTTCATCGAGAACGGTGATACGGGGTCGTTCGACTACGAGAAATTCTTCTTCCCGATGGCGCCTCCGCCTCCGCCGGTCAGAGTCCGATCGTTTTCCCGATATTCGGAAAGGCGGTGTGGCGGAGATTGCTCCAAGTCATGCTCTAAGTCGTCGGACGACGAGTTTGTGAGCTTGGGCTCATCTACTTCGGGCGTTTGTTCTTCGGAATTCATCAATCCATATGGAATTCGCTCCTCATCCCAAACTCAGAAAGATTCTGAATCTTCGTCAGATAGATTATCTCAATTTGGCACAGCACGCGATCACCATGACTTTGACATGCAAAATGAACCGTATTGGTATGATGAGAAAGATGATGACGATTTCATGACCCCCAGTTTTGAGGGGCCAGAGTTCTTTGGCTGTCAAAGTGAGGATAAGTTCATCATGACATCAGAAAGGGAGAATCAACACGAAAATCTTCTGAAAAATAATTGCAAAAGTGAAGTATTCCAAGTGGAGGGAAATGGGGATTGCATGGACGAACTATGCCTTCATAATCATTCTGATGTAGGAAATGAAAATGTGACTTGTTTAAAAGACTTTTGTGATATTTATAAGAAAGAGCAGCTTGAAGGAGGATTAGTTAGAGAGGTTGAGAATCCTACTTTTGTCTATAATTGTGAAGTTCCATTTAACAAACGCTCTGCAGGTTCAGGAGAGTCTTGTAGTGGACATCCTAGTACTGAACACTACCCAAGTTTAAAGGAAATTCATCTGAATGATCTGCATTTAAAGGTTGTTGGGGATAGTTCCTCCACTGATTCTGCTCCAGAGCATCCTAGGAACCAAACTTTTGACCTCTATCCTAACCGTAACAGCAATAAGGGTTACAAAGCTCCCCTTGACTTAACTATCGAAGTTGCTGAAACAGACCTGCCAAATGGACTCACTAGCTATAAAGCTCAAGCTTCTGGGGAATTCACTGAAGAATGCCAAGATCCAGAAAATACAGTAGATGGAGAAGATGCTACTGATGATGAGCTTTCAAAGTACACTCTCGAGGATGAATATGAAGTATTTGACTTGAGAATTATACATAGAAAGAACAGGACTGGGTTTGAAGAAAGTAAAGATCTGCCCATTGTGCTGAATACAGTCATAGGCGGCAGGTACTATGTAACAGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCAGACGGGAATAGATGTCTGCTTGAAGATTATAAAAAATGACAAAGACTTCTTTGACCAAAGCTTAGATGAAATTAAACTCCTAAAACTTGTCAATAAGAATGACCCAGCTGATGAACACCACATATTGCGACTTTATGATTACTTCTATCATCAGGAGCATCTATTCATTGTTACTGAGCTTCTGCGAGCAAACCTATACGAATTTCAGAAATACAATCAAGAATCTGGTGGTGAGGCATATTTTGCATTGAGCAGGTTGCAGCTCATTGCTCGTCAATGTTTGGAGGCCATGCAATACTTGCATAGCTTGGGAATAATTCACTGTGACCTGAAGCCGGAAAATATTCTTATTAAAAGTTATAAAAGATGTGAGATTAAAGTTATTGATCTAGGAAGCAGTTGCTTTCAATCAGACAATCTATGCCTATACGTGCAGTCACGATCCTATCGGGCGCCTGAAGTGATGTTAGGCCTCCAATATGATGAGAAGATTGACATATGGTCGCTTGGCTGTATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGAAGCTGTAGCAATTATTCTCGCGCGCATGATTGGAATGCTTGGCCCTATTGATATGGAGATGTTAGTTAAGGGGCAGGAAACACACAAATATTTCACAAAAGTATATGATATTTACCATGTAAATGAGGAGACAGGCCAATTGGAGTACATAATTCCAGAGGAGTGGTCGTTTGAGCAGCACCTGCAGGTTTCTGATACGATGTTTATTGACTTTGTCAGATTCTTGCTTAGCACCAATCCCAGACGGCGACCAACTGCAAGACAGGCACTGAAGCATCCATGGCTTTCCCATGTTTATGAATCCCCGTAG 2169 0.4246 MAVSDVGAVLEFLRNNGFTEAESALKEDFIENGDTGSFDYEKFFFPMAPPPPPVRVRSFSRYSERRCGGDCSKSCSKSSDDEFVSLGSSTSGVCSSEFINPYGIRSSSQTQKDSESSSDRLSQFGTARDHHDFDMQNEPYWYDEKDDDDFMTPSFEGPEFFGCQSEDKFIMTSERENQHENLLKNNCKSEVFQVEGNGDCMDELCLHNHSDVGNENVTCLKDFCDIYKKEQLEGGLVREVENPTFVYNCEVPFNKRSAGSGESCSGHPSTEHYPSLKEIHLNDLHLKVVGDSSSTDSAPEHPRNQTFDLYPNRNSNKGYKAPLDLTIEVAETDLPNGLTSYKAQASGEFTEECQDPENTVDGEDATDDELSKYTLEDEYEVFDLRIIHRKNRTGFEESKDLPIVLNTVIGGRYYVTEYLGSAAFSKVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFALSRLQLIARQCLEAMQYLHSLGIIHCDLKPENILIKSYKRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNEAVAIILARMIGMLGPIDMEMLVKGQETHKYFTKVYDIYHVNEETGQLEYIIPEEWSFEQHLQVSDTMFIDFVRFLLSTNPRRRPTARQALKHPWLSHVYESP 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0057 722 FunFam Serine/threonine-protein kinase ppk15 492 716 - -
Lele04g0057 722 SMART serkin_6 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0057 722 PANTHER DUAL SPECIFICITY PROTEIN KINASE 109 716 - -
Lele04g0057 722 MobiDBLite consensus disorder prediction 105 123 - -
Lele04g0057 722 Gene3D Transferase(Phosphotransferase) domain 1 467 715 - -
Lele04g0057 722 MobiDBLite consensus disorder prediction 105 131 - -
Lele04g0057 722 ProSiteProfiles Protein kinase domain profile. 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0057 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Lele04g0057 722 SUPERFAMILY Protein kinase-like (PK-like) 402 719 IPR011009 -
Lele04g0057 722 Gene3D Phosphorylase Kinase; domain 1 408 494 - -
Lele04g0057 722 Pfam Protein kinase domain 415 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0057 722 CDD PKc_DYRK_like 413 715 - -
Lele04g0057 722 FunFam Putative serine/threonine-protein kinase dyrk2 407 494 - -
Lele04g0057 722 MobiDBLite consensus disorder prediction 290 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0057 Lele-ChrLele04 337986 341888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0057 410 710 MAP Kinase Gene Family AT5G19010 31.153 7.66e-34 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lele04g0057 Pkinase 1.1e-51 CL0016