Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0032 ATGAATGAGGGAGACCGTGCCGGCTCTGCCTCTCCCTCTCCCTCCTTCGAACCCCCCCACAATGGCGCCGCCGACTCGGAAGTCGCCGGTTGTTCCGACTTGGAACCCGTGGCCGGTGATGCCGACTTTTCTGGGCCTGGAGATGGAAACGTTGCCGGTAGAGTGAAGGGACCGTGGTCCCCAGAGGAGGATGCCGTTCTCAGTCGATTGGTTAGCAAGTTTGGGGCGAGGAATTGGAGCATGATCGCGCGCGGGATACCCGGTCGCTCCGGCAAGTCCTGCCGTCTCCGTTGAGATAGACAAGAAACTGAGCTAGTAATGTGGAACTACACAAAGGAGTGGAAACAATTGATAGACAAAGTAATGTTCCATTCTCTACATCATGATTCAACACCATTTGAGAAGATTGATGTGAGGAAAGTGTATGACAATTATGTATTGCTTTCATCTAATTTATATTTGCTGCAGCTTCAAGAGTGCTTAGTAGATCATCTTGCAATAATGATCAATTATGCATCTGTGGATGTGGCTTTGTTGGATGAATACAATATTGAGATACTATTTCTTCTTTGTTGTCATTATCTCCTTGCTTTAGATATATTGGGAACTGGGACAAACCACCTTGAACTTTTTAGATAAGAAGAAGATCGCATTATAGTTGCAGCCCATGCAGTACATGGAAACAAATGGGCAGCAATCGCTAGGCTTCTTCCAGGCAGAACAGATAATGCTATCAAAAATCACTGGAATTCTACACTTAAGCGCAGGTGCTTGGATCTTGGAAGATGCATACCGGTGGGCATGGGGCAAGAGGGCAGCCTTGAGGTCCCTGACAAAATAAAGGCATTTTCCGAAGAAACCATGTCAGCAGGGGACATCAATTCATTGAATCCCATGCAAATTAAGAATGTCGGGATGGATGGTGGTATTAATCAGCATGAAGATAATCCTCCAAGAAACGATGGTGCTGGAGTGGAGGAACATCCTACCCTGTGTCAACCAGTAGCACGTGTTAGTGCATTTAGTGTCTATAATCCTCCAAGCAGGCCAACAACTGGATCCGCACATTCAAGGATGCTCCCGATGCAGGGTCCTTTGATTCAATCGTCCAAAGTTGAAGTAGGAGCCTGCAAGCTATTTGAGGAAGTTGGCAGTGAGCCCATGGTTCCGGTGCAATGTGGTCATGGCTGCTGTTCCGCAATTTCTCGTGAAAGCCATTCTCATGATTCGCTACTGGGTCCTGAGTTCATAGACTATTTGGAGCCGCCATCCTTTTCAAGTCATGAATTGATATCTATAGCTACAGATCTGAACAACATTGCTTGGATCAAGAGTGGCCTAGATGCCTTCAAAATGGCTTCTTTGAGGCGGGAGCAAGCAAGTTTGTGGGTGTGA 1395 0.4688 MNEGDRAGSASPSPSFEPPHNGAADSEVAGCSDLEPVAGDADFSGPGDGNVAGRVKGPWSPEEDAVLSRLVSKFGARNWSMIARGIPGRSGKSCRLRXDRQETELVMWNYTKEWKQLIDKVMFHSLHHDSTPFEKIDVRKVYDNYVLLSSNLYLLQLQECLVDHLAIMINYASVDVALLDEYNIEILFLLCCHYLLALDILGTGTNHLELFRXEEDRIIVAAHAVHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCLDLGRCIPVGMGQEGSLEVPDKIKAFSEETMSAGDINSLNPMQIKNVGMDGGINQHEDNPPRNDGAGVEEHPTLCQPVARVSAFSVYNPPSRPTTGSAHSRMLPMQGPLIQSSKVEVGACKLFEEVGSEPMVPVQCGHGCCSAISRESHSHDSLLGPEFIDYLEPPSFSSHELISIATDLNNIAWIKSGLDAFKMASLRREQASLWV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0032 464 MobiDBLite consensus disorder prediction 295 327 - -
Lele04g0032 464 CDD SANT 58 97 IPR001005 -
Lele04g0032 464 SUPERFAMILY Homeodomain-like 53 249 IPR009057 -
Lele04g0032 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 97 IPR017930 -
Lele04g0032 464 Gene3D - 211 256 - -
Lele04g0032 464 ProSiteProfiles Myb-like domain profile. 56 102 IPR001005 -
Lele04g0032 464 PANTHER MYB PROTEIN-RELATED 56 317 - -
Lele04g0032 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 214 257 IPR017930 -
Lele04g0032 464 SMART sant 55 104 IPR001005 -
Lele04g0032 464 SMART sant 207 255 IPR001005 -
Lele04g0032 464 Pfam Myb-like DNA-binding domain 56 97 IPR001005 -
Lele04g0032 464 Pfam Myb-like DNA-binding domain 213 252 IPR001005 -
Lele04g0032 464 ProSiteProfiles Myb-like domain profile. 211 253 IPR001005 -
Lele04g0032 464 Gene3D - 55 101 - -
Lele04g0032 464 CDD SANT 214 253 IPR001005 -
Lele04g0032 464 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0032 Lele-ChrLele04 179821 183874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0032 51 97 MYB Transcription Factor Family AT3G55730 76.596 1.28e-17 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele04g0032 Myb_DNA-binding 3.1e-12 CL0123