Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0025 ATGCTAAGGCTTGTTGCGTTTGACCTGTACCATTCAGAAATCACGTATCAAAGTCCGGATGGTTGCGGCAGCTCCGATCGAACTGCACCAATAGCAGGTTTAACGAGCGGGATTTGCGCGGCACTGATAGTGGCCATTATTGCGGTTCTTGTCTACAAACGGCACAGACGAATCAAGGAGTCCCACGAATGGCTGGTCAGAGAGCGAGAGGGGATCCTGAACGCAAGTGAGGGAGGCAGGGCCGCAAAGCTCTTCTCGGGAAAAGAACTGAAGAAAGCTACCAACAACTTCTCCAGAGACCGCCTCCTCGGCGCCGGAGGCTACGGCGAAGTCTACAAAGGCATTCTCCCGGACGGCACCCTCGTAGACGTGAAATGCGCAAAACTGGGGAACGCGAAAGGCACTGACCAAGTGCTAAACGAGGTGCGCATATTATGCCAAGTCCACCACCGTAACCTGGTGGGTCTGCTGGGTTGCTGCGTGGAGTTAGAGCAGCCGATGATGGTGTACGAGTACGTAGAGAACGGGACTCTCCTCGATCACTTACAAGGACGGAGAGCCCTAAGTTCGTCTCATCGGCTTCGAATAGCTCAGGACACGGCACAAGAACTGTTGACGGCGCAGAGAGCCATAGATTTTAACAGGGAGGCGGATGATGTGAACTTGGCGGTATATGTGCAGAGGATGGCGGAAGAGGAGAGGGTGATGGAGGTGATAGATGCAGGGTTGAAGAATGGTGCCACCACTCTGGAAGTAGACACTATCAAGGCTTTGGCGTTTTTGGCTCTCGGATGCTTGGAGGAGCGCAGGCAGAACCGACCTTCCATGAAAGAGGTCGTTGAGGAGATCGAGTATATCATTGGCATTGCCACCGCCACCAAACATACCCAAAACTAG 897 0.5351 MLRLVAFDLYHSEITYQSPDGCGSSDRTAPIAGLTSGICAALIVAIIAVLVYKRHRRIKESHEWLVREREGILNASEGGRAAKLFSGKELKKATNNFSRDRLLGAGGYGEVYKGILPDGTLVDVKCAKLGNAKGTDQVLNEVRILCQVHHRNLVGLLGCCVELEQPMMVYEYVENGTLLDHLQGRRALSSSHRLRIAQDTAQELLTAQRAIDFNREADDVNLAVYVQRMAEEERVMEVIDAGLKNGATTLEVDTIKALAFLALGCLEERRQNRPSMKEVVEEIEYIIGIATATKHTQN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0025 298 Gene3D Transferase(Phosphotransferase) domain 1 200 297 - -
Lele04g0025 298 SUPERFAMILY Protein kinase-like (PK-like) 81 202 IPR011009 -
Lele04g0025 298 Gene3D Phosphorylase Kinase; domain 1 73 172 - -
Lele04g0025 298 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 203 286 IPR045274 GO:0007166
Lele04g0025 298 FunFam Wall-associated receptor kinase-like 20 59 172 - -
Lele04g0025 298 ProSiteProfiles Protein kinase domain profile. 97 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0025 298 Pfam Protein tyrosine and serine/threonine kinase 100 202 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0025 Lele-ChrLele04 137670 140314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0025 203 289 Receptor kinase-like Gene Family AT5G02070 55.172 6.32e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele04g0025 PK_Tyr_Ser-Thr 3.5e-17 CL0016