Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0019 ATGGCGAATCGGTGGTGGGCTGGAAATATCGTGATGAGACCCACCGACCCCATGTCATCTTCTCCGTCACTCCAGCTAAGAAACCCAGAAGATGAACCCGGCGGATTGAATCGTCTCGTGCCTAGACGAGAACAAGAATCCATGGACAACGCCACCTCAACTAATAGCAGCAACAGCAACACAAATCCAAACGTCCAAAACACCTTAGATGACTATCGCCGTGAAGCCAATGACCAGAACCCCGGGAGCCACGAAGCGGTCGAACCCGGCAGCAGTGGCCGCCGACCGAGGGGTCGCCCACCGGGGTCCAAAAACAAGCCGAAGCCTCCTATCGTTGTAACGAAAGAAACCCCAAACGCGCTTCGAAGCCATGTGTTGGAAATTGGAAGCGGCGGCGATGTGGTTGAGAGCATCGCCACCTTCGCGAACCGCCGGCACCGAGGGGTATCAGTGCTTACTGGAAGCGGCATTGTGACCGATGTGACGCTCCGGCAACCGGGGACACCTGGTGGGGTAATTACGCTTAATGGAAGGTTCGAGATATTGTCATTGTCCGGGGCATTCTTACCGGCGTCTACACCGCCGGGGGGCACGGGGCTAACGGTGTATTTAGCGGGGAGACAGGGGCAGGTAGTTGGGGGTACGGTGGTGGGTTCTCTGGTGGCTTCGGGGCCAGTGATGGTGATTGCGGCCACATTTGGAAGCGCTACTTATGAGAGGCTACCACTAGAGGAAGAGGCGGGAGGTGAGGGAACGCAGGTGGTGCAGCAGCAATCAAGAAGTACAGGAACGGCGGCGGCATCACAAGTTCCATTGGCCATGTACAATTTACCACCAAATGGGCAGATGCCCCACGACCTGTTTTGGGGCTCTCCACCTCTCCCTCCGCCCCCATCTTACTGA 903 0.5703 MANRWWAGNIVMRPTDPMSSSPSLQLRNPEDEPGGLNRLVPRREQESMDNATSTNSSNSNTNPNVQNTLDDYRREANDQNPGSHEAVEPGSSGRRPRGRPPGSKNKPKPPIVVTKETPNALRSHVLEIGSGGDVVESIATFANRRHRGVSVLTGSGIVTDVTLRQPGTPGGVITLNGRFEILSLSGAFLPASTPPGGTGLTVYLAGRQGQVVGGTVVGSLVASGPVMVIAATFGSATYERLPLEEEAGGEGTQVVQQQSRSTGTAAASQVPLAMYNLPPNGQMPHDLFWGSPPLPPPPSY 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0019 300 MobiDBLite consensus disorder prediction 1 113 - -
Lele04g0019 300 SUPERFAMILY AF0104/ALDC/Ptd012-like 119 245 - -
Lele04g0019 300 MobiDBLite consensus disorder prediction 46 70 - -
Lele04g0019 300 Gene3D - 121 258 - -
Lele04g0019 300 CDD DUF296 122 207 IPR005175 -
Lele04g0019 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 54 290 IPR014476 GO:0003680
Lele04g0019 300 FunFam AT-hook motif nuclear-localized protein 121 248 - -
Lele04g0019 300 Pfam Plants and Prokaryotes Conserved (PCC) domain 122 233 IPR005175 -
Lele04g0019 300 ProSiteProfiles PPC domain profile profile. 118 255 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0019 Lele-ChrLele04 103342 104244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0019 1 300 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 51.385 1.83e-70 219