Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0009 ATGGGTTGCTGCTTTAGTGCGAGGATCAAAGCTGAGAGCCCTCCTCGCAATGGTTTGACTTCAAACTATGGTAACACAAAAGATGATGGTTTGAGTGGTTTAAGTGATAGGATCTCCACTCCCTCTGTGCCTCCGACTCCCCGGTCAGAGGGTGAGATCTTGAAGTCCTCCAACATAAAGAACTTCAGTTTCAATGAGCTAAGAACTTCTACAAGGAACTTTCGTCCAGATAGTGTGGTGGGTGAAGGTGGATTTGGCTGTGTATTTAAGGGGTGGATTGATGAGCATACACTTGCACCAGTTAAACCAGGGACTGGGCTTGTGATTGCTGTGAAGAGGCTTAACCAAGAGGGCCTTCAGGGACACAATGAATGGCTGACGGAAATAAACTACCTGGGGCAGCTACATCATCCTAATCTAGTGAAACTGATTGGTTACTGCTTAGAGGATGACCACCGGATTTTGGTGTATGAATTTTTGGCTAAGGGCAGTTTGGATAATCACTTGTTTAGGAGGGCTTCTTACTTTCAACCACTTTCTTGGAGCATCCGTATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTGGCATTTCTTCACAGTGACCCAGTAAAAGTGATATATCGAGACTTCAAAACTTCTAACATCTTGATTGATTCGAACTACAATGCAAAGCTCTCTGATTTTGGCTTGGCAAAGGATGGACCAGCAGGTGACAAGAGCCATGTCTCTACAAGAGTAATGGGAACCTACGGCTATGCTGCTCCTGAGTATATCGCCACAGGCCACTTGACTAAAAGGAGTGATGTGTACAGCTTTGGGGATTCTAGCGACATGGCTACGGTGGGAGGGAGCTCACAAAATCAGACAGTCAAAAGTAGTCATAACTCAAGCAGCAATGGTCCTAAGCAGCGTAGAAGAAGCATCAATGGATCGTCGAATGGAGAAGTTTTTGATTTTGTAAATGAGGAAAGAAATAAGCGCCCTTCATTCAGGTCGAAGTCACTAGGCATGCGTTGTAGAGCATTGGCTGAAGATGTTTTAGGTAAAAGGAGGGAACGAAGGTAA 1065 0.4516 MGCCFSARIKAESPPRNGLTSNYGNTKDDGLSGLSDRISTPSVPPTPRSEGEILKSSNIKNFSFNELRTSTRNFRPDSVVGEGGFGCVFKGWIDEHTLAPVKPGTGLVIAVKRLNQEGLQGHNEWLTEINYLGQLHHPNLVKLIGYCLEDDHRILVYEFLAKGSLDNHLFRRASYFQPLSWSIRMKVALDAAKGLAFLHSDPVKVIYRDFKTSNILIDSNYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYIATGHLTKRSDVYSFGDSSDMATVGGSSQNQTVKSSHNSSSNGPKQRRRSINGSSNGEVFDFVNEERNKRPSFRSKSLGMRCRALAEDVLGKRRERR 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0009 354 MobiDBLite consensus disorder prediction 15 51 - -
Lele04g0009 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Lele04g0009 354 SUPERFAMILY Protein kinase-like (PK-like) 47 273 IPR011009 -
Lele04g0009 354 MobiDBLite consensus disorder prediction 13 51 - -
Lele04g0009 354 MobiDBLite consensus disorder prediction 280 320 - -
Lele04g0009 354 ProSiteProfiles Protein kinase domain profile. 74 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0009 354 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Lele04g0009 354 Pfam Protein tyrosine and serine/threonine kinase 78 331 IPR001245 GO:0004672|GO:0006468
Lele04g0009 354 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Lele04g0009 354 PANTHER OS01G0588500 PROTEIN-RELATED 46 273 - -
Lele04g0009 354 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Lele04g0009 354 Gene3D Transferase(Phosphotransferase) domain 1 160 354 - -
Lele04g0009 354 MobiDBLite consensus disorder prediction 280 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0009 Lele-ChrLele04 50674 53749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0009 52 273 Glycoside Hydrolase AT3G07070 53.125 3.97e-79 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele04g0009 PK_Tyr_Ser-Thr 1.8e-39 CL0016