Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0005 ATGGAGTCAAAGTTGGAAGAAGGAGCGACATCGTTCAACGTCATGAACATGGTGGGGGGCAGCAACAGCGCAGTAAAAAACTTAGTACAGAAAGTGATTGCAGAGCTGGTGGGGACGTACTTCCTAGTATTCGCTGGGTGTGGAGTGTTGACGGTGGAGAAGATATATGGATCGGTGACATTCCCGGGAATTGCAGTGACGTGGGGATTGACAGTGTTGGCCTTGATTTACTCTCTTTCTCACGTCTCTGGTGCACACTTCAATCCTGCCGTCACCGTCTCTCTCACCCTCTTCCACCTCTTTCCCAGTTGGAAGCAGGCCATATTATATGTGGCGGCTCAATTTGTGGGCGCGCTTCTTGCTAGCCTCACCTTGGTAGCTCTCTTCGATGTTACGCCGCAGGCTTATTTTGGAACCCTCCCCGTTGGGTCTCACCTCCAGTCATTTGGTGTAGAAATCATCGTCACCTCTCTCCTCCTCTTCGTCATCTCTGGGGCTAATGCCGATCCCAGAGCGGAAGCTGGGTTTGGAGGAGTTGCTGTTGGGATGACAATCATGCTGAATGTTTTTATTGCCGGGCCAGTATCAGGAGCATCGATGAACCCGGCAAGGAGCATAGCGCCAGCGATAGTGAGAGGTGTTTACGAGGGAATATGGGTTTACGTTGCAGGTCCAATGGTTGGAGCCATAGCCGGAGCATTCATTTATCGCCTCCTTAGATCCAATCCTGATCATCCTCCTCCACCCCCTCAAAACTAA 759 0.5125 MESKLEEGATSFNVMNMVGGSNSAVKNLVQKVIAELVGTYFLVFAGCGVLTVEKIYGSVTFPGIAVTWGLTVLALIYSLSHVSGAHFNPAVTVSLTLFHLFPSWKQAILYVAAQFVGALLASLTLVALFDVTPQAYFGTLPVGSHLQSFGVEIIVTSLLLFVISGANADPRAEAGFGGVAVGMTIMLNVFIAGPVSGASMNPARSIAPAIVRGVYEGIWVYVAGPMVGAIAGAFIYRLLRSNPDHPPPPPQN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0005 252 ProSitePatterns MIP family signature. 86 94 IPR022357 -
Lele04g0005 252 PANTHER AQUAPORIN NIP2-1 21 242 IPR034294 -
Lele04g0005 252 Gene3D Glycerol uptake facilitator protein. 4 245 IPR023271 -
Lele04g0005 252 PRINTS Major intrinsic protein family signature 219 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele04g0005 252 PRINTS Major intrinsic protein family signature 68 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele04g0005 252 PRINTS Major intrinsic protein family signature 151 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele04g0005 252 PRINTS Major intrinsic protein family signature 30 49 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele04g0005 252 PRINTS Major intrinsic protein family signature 106 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele04g0005 252 PRINTS Major intrinsic protein family signature 182 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele04g0005 252 Pfam Major intrinsic protein 27 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele04g0005 252 SUPERFAMILY Aquaporin-like 25 247 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0005 Lele-ChrLele04 18648 19578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0005 3 246 Major Intrinsic Protein MIP AT5G37820 54.980 2.58e-92 273