Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0004 ATGGGCTTCTCTCCTCCAAAAATAATCGGGATTGACTCTTGCGAGTCTTCCAATGCTCCTTCTTCTTCCTATCTAGTTGCAGATCACTATTGTGACTACAAGCTCAAATTTAGGACCATTCTGAGAAAAATGATCTGGGAGCTTGGTTTTGCCTGCGTTGCCCTGCCTCGCCGACGGCCAAGATTCGTTAAAAACGACCGCGACGGATCTAGAAAGACGAATCTAGAGCACAACAAGGCGTGGTTGCTTGCGGAGTCTGGTGGGTGTGGAGCAGAGGTGACGAATGCTGACCCCCAATCTTTTCACTCGTCTTTCCGTTTCAGTTTCTGTTCTCAGGTGGAGCTCGAATCCTCGAGCATGAATTCTTCCGCTGCTGCAACCGTTCTGATGGTTAATCTGGACGATGGAATGAATAAGTTTCGAGCTCGAGAGCTGAAATGTCGGAGGATGGAGTCCTTGGAAAAAAGCATATCCCCTGTAGCCAACACTTTGATCAGGTTCAACTACGGTGAAATTCTATCTGCTACTCGCAATTTCTCCAAAGGCAGAGTATTGGGGAGAGGGGCCTTGAGTTGTGTATTTAGGGGTAGAGTTGGGCTTTTGAGGACTGCTGTAGCAATCAAACAATTGGACAAGGAAGACAAGGAATCTGCAAAGGCGTTCTGTAGAGAACTGATGATTGCCAGTTCTCTTCATAACCCAAACGTTGTTACCCTTGTGGGTTTTTGTATTGACCCGGAGGAGGGTTTATTTCTGGTGTACAAATATGTATCCGGGGGCAGCCTAGAGCACCATTTGCATGAAAGGAAGTGTGTGAAGGGTGGTTCAGCACTTCCCTGGTCCGTGAGGTATAAAGTTGCGATTGGAATTGCAGAAGCCGTGTCTTATCTGCATAACGGAACTGAAAGATGCGTTGTTCACAGAGACATTAAACCCTCAAACATTCTCCTTTCCTCTAAAAAGACTCCCAAGTTATGCGATTTTGGATTAGCTACATGGACTTCTGCACCCTCAGTTCCTTTCCTCTGCAAAACAGTCAAGGGAACATTTGGCTATTTGGCTCCTGAATATTTCCAACATGGAAAAACATCTGATAAGACTGATGTTTATGCTTTCGGAGTTGTTTTATTAGAACTCATAACTGGCCGGAAGCCAATAGAAGCAAAAAAGCCACCAGGAGAGGAGAACTTGGTCTTATGGGCTAAACCCTTGCTACAGAAAGGGAATGGATCCATTGAAGAGTTGCTGGATCCTCGACTCAAGTGCAGTTTGAGATTCTCAAGTCAGATGGCTCAGATGATAGAAGCAGCGGCTGCTTGTGTTACAAATGAAGAATCTCGGAGACCTGGAATACAAGAGATCATTGCAATACTGAGAGGTCAAGAAGAACGTGTCTTGCCTAAAAGGAAGAAGTCTGGTCTACTTGGGAACGGGTTGGTAGTTGATTGCTACCCTCAACTACAACAAACAAATAACGAGATGAAAAGACGCTTGGCTCTGGCAATGCTTGGAGTTTCAGAGTTTGAGGAGGATGATAATCTACATGGCCGTTGA 1554 0.455 MGFSPPKIIGIDSCESSNAPSSSYLVADHYCDYKLKFRTILRKMIWELGFACVALPRRRPRFVKNDRDGSRKTNLEHNKAWLLAESGGCGAEVTNADPQSFHSSFRFSFCSQVELESSSMNSSAAATVLMVNLDDGMNKFRARELKCRRMESLEKSISPVANTLIRFNYGEILSATRNFSKGRVLGRGALSCVFRGRVGLLRTAVAIKQLDKEDKESAKAFCRELMIASSLHNPNVVTLVGFCIDPEEGLFLVYKYVSGGSLEHHLHERKCVKGGSALPWSVRYKVAIGIAEAVSYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKTSDKTDVYAFGVVLLELITGRKPIEAKKPPGEENLVLWAKPLLQKGNGSIEELLDPRLKCSLRFSSQMAQMIEAAAACVTNEESRRPGIQEIIAILRGQEERVLPKRKKSGLLGNGLVVDCYPQLQQTNNEMKRRLALAMLGVSEFEEDDNLHGR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0004 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Lele04g0004 517 SMART serkin_6 179 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0004 517 ProSiteProfiles Protein kinase domain profile. 179 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0004 517 PANTHER OS08G0249100 PROTEIN 137 471 - -
Lele04g0004 517 FunFam Putative receptor-like serine/threonine-protein kinase 257 473 - -
Lele04g0004 517 FunFam probable serine/threonine-protein kinase PBL7 140 256 - -
Lele04g0004 517 SUPERFAMILY Protein kinase-like (PK-like) 167 463 IPR011009 -
Lele04g0004 517 Gene3D Phosphorylase Kinase; domain 1 139 256 - -
Lele04g0004 517 Gene3D Transferase(Phosphotransferase) domain 1 257 472 - -
Lele04g0004 517 Pfam Protein kinase domain 180 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0004 Lele-ChrLele04 10582 13228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0004 165 502 Trihelix Transcription Factor Family AT1G70460 40.407 1.96e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele04g0004 Pkinase 3.1e-46 CL0016