Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1816 ATGGAAATCTCTAGCACCTATAATGGCGGTGGCATGATGTGGTTTTTTAAGGATAGAGGATTTGATGATAAAAGCATACAAGGAATGTTCAGGAAGTGCAAGTGCCTTGAGGTTGTGCATCAAGAAAGAGCATCTGAGAATTGGACCTATTTGACAAACATTGGCATTCAAGAGAGGAAACTCCCATCAATTGTTTCAAAATGTCCCAAGATTCTTACCCTTGGCCTTAGTGAGAAGATAGTTCCCATGGTTGAATGCCTCAAGACCCTGGGAACAAAACCCAATGAAGTTGCTTCTGCTATAGCCAAGTTCCCTCGTTTACTCTCACATAGTGTGGAAGAGAAGCTTTGTCCTCTTTTGGCCTTCTTTCAGGCATTGGGCATCCCTGAAAAGCGACTTGGAAAAATAATACTGCTCAATCCAAGGCTTATCAGCTATAGCATTGAAACAAAGCTCACAGAAATTGTGGACTTTCTTGCTAGCCTTGGTCTTAACAAGGATGGAATGATTGGAAAAATTTTAGTGAGGAACCCATATATTATGGGATATGGCGTTGATAAAAGACTCCGCCCTACTACTCAGTTTCTGAAGTCAATAGGTCTGACCGATCTCGAACTTCAAGTGGTAGCTGTGAACTTTCCAGAAGTATTGAGTAGAGATGTGAACAGGGTTTTGGAGCCTAATTGTGCATACTTAAAGAGATGTGGATTTCAAGACAGACAGATTGTTGCTTTGGTAGTTGGATTTCCTCCAATCCTGTTCAAGAGCATCCAAAATTCTTTAGAACCCAAGATAAGGTTTCTTGTAGATGTGATGGGGAGACAAATCCATGAAGTTATTGATTATCCTGGCTTCTTTCGTCATGGTCTGAAGAGAGAGATAGAGTTGCGGCACAAGTTTTTGAAGCAGAGGAACTTAGATTGTAGCTTGAGTGAAATGCTTGACTGTAATAAGAAGAAGTTCTTCTTAAAATTTGGTTTATTAGAAGGTCATGTGTTGAGTAATAAGGTTTCATTCCCCTTAGAACTTAATTTATGA 1038 0.3998 MEISSTYNGGGMMWFFKDRGFDDKSIQGMFRKCKCLEVVHQERASENWTYLTNIGIQERKLPSIVSKCPKILTLGLSEKIVPMVECLKTLGTKPNEVASAIAKFPRLLSHSVEEKLCPLLAFFQALGIPEKRLGKIILLNPRLISYSIETKLTEIVDFLASLGLNKDGMIGKILVRNPYIMGYGVDKRLRPTTQFLKSIGLTDLELQVVAVNFPEVLSRDVNRVLEPNCAYLKRCGFQDRQIVALVVGFPPILFKSIQNSLEPKIRFLVDVMGRQIHEVIDYPGFFRHGLKREIELRHKFLKQRNLDCSLSEMLDCNKKKFFLKFGLLEGHVLSNKVSFPLELNL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1816 345 PANTHER CGI-12 PROTEIN-RELATED 133 254 IPR003690 GO:0003690|GO:0006355
Lele03g1816 345 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Lele03g1816 345 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Lele03g1816 345 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Lele03g1816 345 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Lele03g1816 345 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Lele03g1816 345 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Lele03g1816 345 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Lele03g1816 345 Pfam mTERF 111 321 IPR003690 GO:0003690|GO:0006355
Lele03g1816 345 Pfam mTERF 15 123 IPR003690 GO:0003690|GO:0006355
Lele03g1816 345 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 97 329 - -
Lele03g1816 345 Gene3D Transcription termination factor 3, mitochondrial 112 329 IPR038538 -
Lele03g1816 345 Gene3D Transcription termination factor 3, mitochondrial 3 111 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1816 Lele-ChrLele03 17692613 17693650 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele03g1816 mTERF 1.7e-44 No_clan