Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1732 ATGATTTATGCAAAGACTCTTAGAGTGGTTGTGCAACGAGTAGAAGCTGCCAAGTATTCAGATGGATTAGCTTTCTTTCTTTCTTTGATTAACCACACTCTTGGCCTCCTTAGTCGTTTTCTGGGTCTTGTTAACCCGTCTCAGTTGAATCCAAACAAGCTTGTGGCCGTGGAGTTTGACAGCCACTACGATCCTATCTTGCCAGGTATTGACTTGAGGAGTGGGAATCTGATTACAGCTTGGATTGATTTTAAGAGTTACACTAGGAATCTGCAAGTTTTCTTGCGTTACTCCGATGTCAAGCCTCAAAGACCGATTCTAGCTGTTGATGATATTGAACTTTCTGATTATTTGAAGGGGAAATTGTATGTGGGGTTTTCAGCTTCTACTGAGGGAAGCACCTTAGTGACCATTGTTGTAGTCGGCATTTCTGCAAAAGAAACCGGAAAGAAACATCAAAAGAACCTTGAATTAGGTGTTGCTATACTTGGTGCTGCGGTTTTCTGCACAGTAGTTTCAGTTTTAGGATATGTTTCTGTGAGTAAATGGAGGGACATTGCAAAACGGAGGACCTTCAAAATAGAGCGACCAAAGGAATTCAGTTATGGAGAGTTGAAATCAGCGATAAGAGGGTTTCATTGGGCGCGAATCTTTTGTTACGGTACCTCAGTGACCACTATTGTAGTCGGCAATCCTGGAAAAGAAACCGGAAAGAAACATCAAAGTAACCTTGAATTAGGTGTTGCTATAGTTGGTGCTGCGGTTTTCTGTGCAGTACTTTTATGTTTGGTTTATAAAGCTTTCTTTATATCTTCAAGAAGTATTGCTGTTGTGAAAAGGTCCAGACAAACCCATGAGCTTGAAACATACTTCCAAGCCAAACTATCCATTATAGCTAGTTTGAGTCACAGGAACTTGCTTCAGCTTCAAGGTTGGTGTGTTGAGAGAGGTGAGTTACTTCTTGGGTATGACTTCATGCCCCATGGGAGCTTAGAGGATGCTCTATACCAAGAATATGAACAATGTAACGTATTGAGTTGGTCTCATAGACGCAACATTGTTCTTGGGGTGGCTTCTGTTCTCACTTATCTTCACCAAGATTGTGAGCAGAGAGTGATGGACTTCAAGACTTCGAATATACTGCTTGATGGAAACTTGAATCCTAGACTGGGGTACCTTGCACCAGAGTACCTTCAGCATGGGAAAGCAACTGAGAAAACGGATGTATTCAGCTATGGTGTTGTAGTGCTTGAAGTTGCATGTGGAAGGAGGCCAAGTGAGAATGAAGGTCAGAGGATGACGAATTTTGTTGATTGGGTCTGGGCACTTCACTCACAAGGGAAGATAATAGAAGCAGCAGATAGAAGGCTGAATGGAGAATTTGAGAAAGAAGGAATGAGGAAGTTGTTACTGTTAGGGTTGACCTGTGCAAATCCTGATAATGCAGTTCATTTCGGGTGGACATTTTTAAGCTGTGGATGGTAG 1485 0.4209 MIYAKTLRVVVQRVEAAKYSDGLAFFLSLINHTLGLLSRFLGLVNPSQLNPNKLVAVEFDSHYDPILPGIDLRSGNLITAWIDFKSYTRNLQVFLRYSDVKPQRPILAVDDIELSDYLKGKLYVGFSASTEGSTLVTIVVVGISAKETGKKHQKNLELGVAILGAAVFCTVVSVLGYVSVSKWRDIAKRRTFKIERPKEFSYGELKSAIRGFHWARIFCYGTSVTTIVVGNPGKETGKKHQSNLELGVAIVGAAVFCAVLLCLVYKAFFISSRSIAVVKRSRQTHELETYFQAKLSIIASLSHRNLLQLQGWCVERGELLLGYDFMPHGSLEDALYQEYEQCNVLSWSHRRNIVLGVASVLTYLHQDCEQRVMDFKTSNILLDGNLNPRLGYLAPEYLQHGKATEKTDVFSYGVVVLEVACGRRPSENEGQRMTNFVDWVWALHSQGKIIEAADRRLNGEFEKEGMRKLLLLGLTCANPDNAVHFGWTFLSCGW 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1732 494 ProSitePatterns Legume lectins beta-chain signature. 55 61 IPR019825 -
Lele03g1732 494 Gene3D - 6 67 - -
Lele03g1732 494 Pfam Legume lectin domain 69 151 IPR001220 GO:0030246
Lele03g1732 494 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 134 IPR013320 -
Lele03g1732 494 ProSiteProfiles Protein kinase domain profile. 245 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1732 494 Gene3D Phosphorylase Kinase; domain 1 261 326 - -
Lele03g1732 494 Gene3D - 68 166 - -
Lele03g1732 494 Gene3D Transferase(Phosphotransferase) domain 1 391 483 - -
Lele03g1732 494 Gene3D Transferase(Phosphotransferase) domain 1 327 390 - -
Lele03g1732 494 Pfam Protein kinase domain 264 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1732 494 PANTHER - 15 481 - -
Lele03g1732 494 SUPERFAMILY Protein kinase-like (PK-like) 263 480 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1732 Lele-ChrLele03 12341224 12345719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1732 21 481 Receptor kinase-like Gene Family AT5G55830 42.908 1.11e-133 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele03g1732 Pkinase 1.2e-11 CL0016