Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1620 ATGCTTTGCGGTTTAATATTGTGCATTGTTTGGTATCATCAAGTAGTTTTTGGAAAGAATGTTATTGTGAATTTTCCCCTGAAGCATGAAAAGCTTCAATTAACTTTTGGAAGAATTGCTGTGAAGAATTGTAGTTTTAGTTATATTGATCTTTGTCATCAGCGAACCTCCACCATGGTTGCCGCCAAGAAAAACAAGAAGACCCATGAGAGTATCAACAACAGACTCGCTCTGGTGATGAAGAGTGGGAAATATACTTTGGGTTATAAAACGGTTCTGAAATCCCTTAGGAACTCTAAAGGGAAATTGATTATAATTGCCAACAATTGCCCACCTTTAAGGAAATCAGAGATAGAGTATTATGCAATGCTTGTCAAAGTGGGTGTGCATCACTACAATGGAAGTGAGTTCTTCTTCAAAGAGCTTTTGTTTCATATTTGTGATTCTGATATTATCAAGACAATGCCTGGTGAACAGTGA 480 0.3688 MLCGLILCIVWYHQVVFGKNVIVNFPLKHEKLQLTFGRIAVKNCSFSYIDLCHQRTSTMVAAKKNKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIIANNCPPLRKSEIEYYAMLVKVGVHHYNGSEFFFKELLFHICDSDIIKTMPGEQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1620 159 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 71 135 IPR004038 -
Lele03g1620 159 Gene3D - 58 147 IPR029064 -
Lele03g1620 159 SUPERFAMILY L30e-like 71 136 IPR029064 -
Lele03g1620 159 FunFam 60S ribosomal protein L30 60 155 - -
Lele03g1620 159 PANTHER RIBOSOMAL PROTEIN L30 59 137 IPR039109 GO:0003723
Lele03g1620 159 ProSitePatterns Ribosomal protein L30e signature 1. 82 106 IPR022991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1620 Lele-ChrLele03 10587910 10593297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1620 59 159 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 66.964 3.24e-47 147