Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1613 ATGCTTCGTCGTTTAATTTCACTGGGTGTCAACCACGAGGTAGGATTGCATTGTGCTACTTGGGAAGGCATGCAGGCAATCTGTTTGATGTTGTTCTTGTATGGAGTGATTGTGTTAGGGAATTCGGATATTGATGCGCTACTTCAACTCAAGAAGAGCATTCGAAATGACCCTTCTGGACTAGTTAATTCTTGGGATTCCAGGTCTTTAGCTTCTGATGGATGTCCTCAGAATTGGTATGGAATATTTTGCACTGAAGGCAATGTTATATCAATAACTCTGGATAATGCTGGTTTGGTTGGAGAGATCAATTTCCTTGCCATTAATGGCCTTAAAATGCTTCGGAACTTGTCACTTTCAAACAACCAGTTCACGGGAAGTGTCTCACATTTCGGTCCAATGGAATCACTAGAGTTTCTTGATCTTTCAGTCAACAAGTTTCATGGGTTGATACCCTCTGACTTGCTTGAATTGCATAATATAGTGTATTTAAATCTTTCGTCAAATCAATTTGATGGTACAGTTCCCGTCGGCTTTGACAAACTCAAGCGGTTGAAGTACTTAGATTTGTGCTCTAATAACTTTTCTGGGGACATTATGCATATCTTTTATCATATGGGTGGCGTGGTTCATGTTGACCTAAGCACCAACATGTTTTCTGGTTCCCTGGATTTGGGACTTGGAAACAGCTCGTTTCTCTCCTCAATTCAGTATTTAAATGTCAGCCACAATTCCTTGACTGGTGATCTGTTTGCCCATGATGGGATGCCATACCTTGACAGTTTAGAGGTCTTTGATGCTAGTAATAATCAATTAGTGGGTAATATTCCTTCCTTCACATTTGTGGTATCTCTGAGGATTCTTTGGCTCGGATGCAACCAGTTATCTGGTTCTCTTCCAGAAGGTCTATTGAAGGAGAGTTCAATGGTGCTGTCTGAACTGGATCTTAGTAAAAACAAGCTCAAAGGTCCTGTTGGAAGCATTACTTCTGTAACTCTGAAGAAGCTTAATTTATCTTCAAACAAACTGTCAGGACCCTTACCTTTCAAGGTGGGCCACTGTGCCATAATAGATTTAAGTAACAACATGCTATCGGGTAACTTGTCGAGAATTCAGTATTGGGGAAATTATGTTGAGGTGATTCAGCTTAATTCGAATTCGTTGACTGGAATGCTTCCTAACCAAACTACACAATTTTTGAGGTTGACTGAACTTAAGATATCTAATAACTCATTAGAAGGCAGTCTCCCGTCAGTCTTAGGAACATACCCAGAACTAAAAGAGATTGATCTTAGCCACAACCTACTTTCCGGGCCCCTCCTTCCGAGCTTTTTCACCTCGACCAAATTGACCGAGCTTAACCTCACGCACAACAACATTTCTGGATCGATATCTTTTCAACAGATTCCAAATAACCCGCTAGTTTATGCTGAAAATTATAGTCTTGTGTCTGTTGATCTCTCATACAACAACTTGAGTGGGTATCTACCTACAGAAATAGGTAAGCTTCACAATTTGGCAAGTCTCAATCTTTGTAACAACAAATTCGAAGGCGTTATTCCTGATGATCTTCCTGATCAACTGAGAGAACTCAACGTGTCCTTCAACAATTTTTCTGGCATTGTGCCTGATAAGTTAATGAAGTTTCCTGAATCAGCGTTTTGCCCTGGAAATTCTTTTCTGATCCTTCCTCATTCGCTCGCTTCACCAGAAGATGGTGGTGAACTCGGGTTGAAGGAAAAGGGGCCACATATAAAATCTGCAACCAAGATTGCCTTGATCGCGAGTTTGGTTTCTGGTGCTTTTGTTATGGCCCTTCTGAGTGTAATAAGTTTTTATAGGTTTCAGTGGAAAAAACAAACAACTAATCATGAAAATGAAGTGAAAGATGTTGCTCATCAGAGTTCTTCTCCATCTGGTAATGAAGTACCTAATAGAAACATAGAAGCAATATCTTCAACCCAGAAGAGATCTGATGATGTCAGAAATGTTCATACTGCTGAAGAGAATCCGAAAGATTTTGACTCTTCTGAATTGGTTAAGAATGAGGAAGGAATATCATCTCCAATGTCTTTGCTGTCATTTTCAAATCCTTCATCTTCTAGAAGCCACCCTTTTGAGAATCCTGGTGCTCTCAAAATATACTCGCCGGATAAATTGTTTGGCGATTTGAATCTATTTGACGGGGCCTTGGAGCTCACTGCAGAAGAATTTTCTAGTGCTACAGCAGAAATTATCGGTAGGAGCTGTCATGGAACTCTGTATAAAGCTACGCTTAACTCGGGTCATATATTGGCTGTCAAGTCATTAAGGGAAGGAATAGCCAAGAACAAGAAGGATTTTGCAAGGGAGGTTAAAAAACTTGGAACCATTAAGCATCCAAGTCTGGTTTCTCTTCAGGGTTACTACTTAGGTCCAAAGGAAACTGATAAATTCATTATATCCAATTATGTCAATGCACAGTCGTTGGACTTTTATCTTCATGATACAAGGAATGTTCATCCAATGTCTCTTGATGAACGATTCTGGGTGGCTATAGCTGTGGCACAATGTCTGAATTACTTACACAATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATCCTCCTTGAAATTCCTAACCACAATGTGCTGCTCACTGACTACAGCCTGCATCGGATACTAACCACAGCCGGTACTGCCGAGCAAGTTCAAAATGCAGGTTTTCTCGGTTACCGGCCTCCTGAATTTGTGAACTCGAGCAAACCATGCCCATCTTTGAAGAGTGATGTATATGCATTTGGGGTGATCTTGTTAGAGCTTCTAACAGGAAGAGATTCCGGAGACATTGTTACAGGGATCCCCGGCATTGTCGTCCTCGCAGACTGGGTGCAGTTCTTGGCGGAGCAAAACCGTGGTGGTGAGTGCTTTGACAGGCTGCTCTTGGACAGGCATGGTGGTGGTGGTGGGGAACGCCAGCCTCGAGTTCTTGATGAAATTCTCAAGGTAGCCCTTAGATGCATACTTCCGGCATCGGAGAGGCCTGACATAAAAACTGTTTTTGAGGATCTTTCAACATTATTAAGGTAG 3078 0.4149 MLRRLISLGVNHEVGLHCATWEGMQAICLMLFLYGVIVLGNSDIDALLQLKKSIRNDPSGLVNSWDSRSLASDGCPQNWYGIFCTEGNVISITLDNAGLVGEINFLAINGLKMLRNLSLSNNQFTGSVSHFGPMESLEFLDLSVNKFHGLIPSDLLELHNIVYLNLSSNQFDGTVPVGFDKLKRLKYLDLCSNNFSGDIMHIFYHMGGVVHVDLSTNMFSGSLDLGLGNSSFLSSIQYLNVSHNSLTGDLFAHDGMPYLDSLEVFDASNNQLVGNIPSFTFVVSLRILWLGCNQLSGSLPEGLLKESSMVLSELDLSKNKLKGPVGSITSVTLKKLNLSSNKLSGPLPFKVGHCAIIDLSNNMLSGNLSRIQYWGNYVEVIQLNSNSLTGMLPNQTTQFLRLTELKISNNSLEGSLPSVLGTYPELKEIDLSHNLLSGPLLPSFFTSTKLTELNLTHNNISGSISFQQIPNNPLVYAENYSLVSVDLSYNNLSGYLPTEIGKLHNLASLNLCNNKFEGVIPDDLPDQLRELNVSFNNFSGIVPDKLMKFPESAFCPGNSFLILPHSLASPEDGGELGLKEKGPHIKSATKIALIASLVSGAFVMALLSVISFYRFQWKKQTTNHENEVKDVAHQSSSPSGNEVPNRNIEAISSTQKRSDDVRNVHTAEENPKDFDSSELVKNEEGISSPMSLLSFSNPSSSRSHPFENPGALKIYSPDKLFGDLNLFDGALELTAEEFSSATAEIIGRSCHGTLYKATLNSGHILAVKSLREGIAKNKKDFAREVKKLGTIKHPSLVSLQGYYLGPKETDKFIISNYVNAQSLDFYLHDTRNVHPMSLDERFWVAIAVAQCLNYLHNEKAIPHGNLKSTNILLEIPNHNVLLTDYSLHRILTTAGTAEQVQNAGFLGYRPPEFVNSSKPCPSLKSDVYAFGVILLELLTGRDSGDIVTGIPGIVVLADWVQFLAEQNRGGECFDRLLLDRHGGGGGERQPRVLDEILKVALRCILPASERPDIKTVFEDLSTLLR 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1613 1025 Gene3D Ribonuclease Inhibitor 228 565 IPR032675 -
Lele03g1613 1025 SUPERFAMILY Protein kinase-like (PK-like) 743 1020 IPR011009 -
Lele03g1613 1025 MobiDBLite consensus disorder prediction 652 678 - -
Lele03g1613 1025 Pfam Protein tyrosine and serine/threonine kinase 744 940 IPR001245 GO:0004672|GO:0006468
Lele03g1613 1025 FunFam Nuclear pore complex protein NUP107 40 201 - -
Lele03g1613 1025 Pfam Leucine rich repeat N-terminal domain 41 84 IPR013210 -
Lele03g1613 1025 SUPERFAMILY L domain-like 42 324 - -
Lele03g1613 1025 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 333 555 - -
Lele03g1613 1025 Pfam Leucine Rich repeat 447 462 IPR001611 GO:0005515
Lele03g1613 1025 Gene3D Ribonuclease Inhibitor 42 207 IPR032675 -
Lele03g1613 1025 ProSiteProfiles Protein kinase domain profile. 740 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1613 1025 FunFam Leucine-rich repeat receptor-like protein kinase 725 817 - -
Lele03g1613 1025 PANTHER OS07G0626500 PROTEIN 30 117 - -
Lele03g1613 1025 MobiDBLite consensus disorder prediction 626 645 - -
Lele03g1613 1025 Gene3D Transferase(Phosphotransferase) domain 1 819 1025 - -
Lele03g1613 1025 SUPERFAMILY L domain-like 258 545 - -
Lele03g1613 1025 Gene3D Phosphorylase Kinase; domain 1 724 817 - -
Lele03g1613 1025 MobiDBLite consensus disorder prediction 653 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1613 Lele-ChrLele03 10528074 10532754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1613 37 561 Receptor kinase-like Gene Family AT5G07280 30.862 6.75e-44 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele03g1613 PK_Tyr_Ser-Thr 2.1e-27 CL0016