Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1611 ATGCCATTGTACACACTAAACAAGCGAATAGAGAGGACAATTGATGGATTAATTGAGACAGGAGACAGTAAGCAAATTTTCCAGAAGGCTATTCAGGAACAAGGAAGAGGCCAGATAATAGACACCTTGGTAGAAATTCAAGAACGACACGAAGAAGTTAGAGGTGTTGAAAGGAAACTTCTTGAATTACAACAGATATTCATGGACATAGCAGTGCTAGTTGATGCACAGGGGTATGCTGGACATTATAGAATCACACGTATTTTGAACACTTCCCTCCAGAAAGCCAAAAGCCTTCAGAAGAATTCTAGAAAATGGATGTGCACTGCAATCATTATACTCCTTATTGATGTCATAATCATTGTCGTTGTCGTCATTAAGCCATGGGTTAAGAAGGGTGCTTAG 405 0.3951 MPLYTLNKRIERTIDGLIETGDSKQIFQKAIQEQGRGQIIDTLVEIQERHEEVRGVERKLLELQQIFMDIAVLVDAQGYAGHYRITRILNTSLQKAKSLQKNSRKWMCTAIIILLIDVIIIVVVVIKPWVKKGA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1611 134 SUPERFAMILY t-snare proteins 11 78 IPR010989 GO:0016020|GO:0016192
Lele03g1611 134 Pfam Syntaxin 11 78 IPR006011 GO:0016020
Lele03g1611 134 Gene3D - 5 74 - -
Lele03g1611 134 Pfam SNARE domain 92 122 IPR000727 -
Lele03g1611 134 SMART tSNARE_6 38 110 IPR000727 -
Lele03g1611 134 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 43 78 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1611 Lele-ChrLele03 10503428 10504434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1611 11 134 SNARE and Associated Proteins AT3G03800 58.647 1.66e-40 135