Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1587 ATGGAGTCTCTATTCACATTGGCTATTAATCACGCTCAGGAAGTTCAAAGTCAAGCTGAAGTCAATTATCTAGGGCAGCTTCACCACGAAAATCTGGTGAAACTTATTGGTTATTGTTCAGAGGATAGAAATAGGCTTCTAGTTTATGAGTTCATGCAAAAAGGAAGCTTGGAGAATCATTTATTTCGAAGTGTTCAACCCATACCTTGGGGGACGCGGATCAGTATTGCAGTTGGTATTGCAAGAGGATTAGCATTCTTGCATGGCTTGGATGCAAATGTCATCTATCGTGATTTAAAGGCTTCTAACATCCTACTGGATTCAGATTTCAATCCAAAGCTTTCGGATTTCGGTTTGGCCAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACCAGAGTTCTTGGAACTCAAGGTTATGCTGCCCCAGAATATGTAGCAACAGATCCTAGGTACAGACCTCCAATGGTGGATGTTCTTGCTGCATTGGAAGCTCTCAGTTCCTCAAGTTCAATCCCAAGGACCCCAAAATCTGACAGTGAGAGTGTTTCAAACAGACATTCTAGTTCTAGTCATCCACAACAAAAGCCAATCAGACATCTAAAGTCTGTCTGA 618 0.4191 MESLFTLAINHAQEVQSQAEVNYLGQLHHENLVKLIGYCSEDRNRLLVYEFMQKGSLENHLFRSVQPIPWGTRISIAVGIARGLAFLHGLDANVIYRDLKASNILLDSDFNPKLSDFGLARDGPTGDNTHVSTRVLGTQGYAAPEYVATDPRYRPPMVDVLAALEALSSSSSIPRTPKSDSESVSNRHSSSSHPQQKPIRHLKSV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1587 205 SUPERFAMILY Protein kinase-like (PK-like) 12 159 IPR011009 -
Lele03g1587 205 FunFam Os07g0541700 protein 52 138 - -
Lele03g1587 205 Gene3D Transferase(Phosphotransferase) domain 1 53 151 - -
Lele03g1587 205 SMART serkin_6 7 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1587 205 PANTHER OS01G0588500 PROTEIN-RELATED 15 153 - -
Lele03g1587 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 94 106 IPR008271 GO:0004672|GO:0006468
Lele03g1587 205 MobiDBLite consensus disorder prediction 169 205 - -
Lele03g1587 205 Gene3D Phosphorylase Kinase; domain 1 7 52 - -
Lele03g1587 205 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1587 205 Pfam Protein kinase domain 13 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1587 205 MobiDBLite consensus disorder prediction 169 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1587 Lele-ChrLele03 10201923 10205824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1587 20 149 Glycoside Hydrolase AT3G07070 60.741 2.98e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele03g1587 Pkinase 2e-31 CL0016