Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1577 ATGCAATCGGATGAGGATGTAGGGAAGATTGCCATGGCCGTGCCTCTTCTTGTTTCTAAAGCACTAGAACTCTTTCTGCAAAATTTATGTGATCGGACATATGACATAACATTGAGAAGAGGGGCAAAGACAATGAATTCTTATCATTTAAAACAATGTGTACAGAGTTTTAACGTCTTCGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGCTACGCTGCTTCTGGAGATGACCGTACTGCCTGCAAGAGAAGGAAAGTTGATGACGATGGAAATGACAGTGATGATGACGCAAAAAGAAATAAGATGCCAGAAAATGTTCATCATTCTGGTGGTAGGGGAAGAGGTCGTGGCAGAGGTAGGGGTCGTGGCCGAGGAAGTAGAACAACAGATCGCGAGAATAATGCACAAGTGAAGTCTGAAGATGATGATGATTATCATCATCATACTGGTGCATCGAAGCACCATGACTTGCGCTGTCACAGCAATGAAAGCATGGAAACTAGTACAGAACATGAAGTGAAGCCTTCCATTAGCAAGACATCGGAAGCATGCATTAGAAATTTCGACTTAAATATGGATCCCGTGGTGGAGGAGGACAGCGATTCGCCAAACAGCATAGCTCCTTTCTCACCTTGTCCTCCCGAAAAACCAACCACAACTCGTCCCCCGGAAAAACCAACCACAACTTGTCCATCTGAAAAACCAACCACCATAGAATTGAGACACGAAGAAATTCCGGGGTGGTCACTATCCGACGTGGAAAAAATGGCCATTGATCCTATCCAACTGGTCAACATGAATGGAAGGATGGATGAAGAAGATGAAGATTATGATGAAGAAAGTTGA 861 0.4355 MQSDEDVGKIAMAVPLLVSKALELFLQNLCDRTYDITLRRGAKTMNSYHLKQCVQSFNVFDFLKDIVSKVPDLGGYAASGDDRTACKRRKVDDDGNDSDDDAKRNKMPENVHHSGGRGRGRGRGRGRGRGSRTTDRENNAQVKSEDDDDYHHHTGASKHHDLRCHSNESMETSTEHEVKPSISKTSEACIRNFDLNMDPVVEEDSDSPNSIAPFSPCPPEKPTTTRPPEKPTTTCPSEKPTTIELRHEEIPGWSLSDVEKMAIDPIQLVNMNGRMDEEDEDYDEES 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1577 286 MobiDBLite consensus disorder prediction 87 116 - -
Lele03g1577 286 SUPERFAMILY Histone-fold 1 71 IPR009072 GO:0046982
Lele03g1577 286 MobiDBLite consensus disorder prediction 87 185 - -
Lele03g1577 286 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 107 - -
Lele03g1577 286 MobiDBLite consensus disorder prediction 128 182 - -
Lele03g1577 286 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 54 IPR003958 -
Lele03g1577 286 Gene3D Histone, subunit A 1 69 IPR009072 GO:0046982
Lele03g1577 286 MobiDBLite consensus disorder prediction 199 242 - -
Lele03g1577 286 MobiDBLite consensus disorder prediction 212 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1577 Lele-ChrLele03 10089620 10091581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1577 1 109 CCAAT-HAP5 Transcription Factor Family AT3G12480 62.069 2.52e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele03g1577 CBFD_NFYB_HMF 2.6e-11 CL0012