Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1542 ATGACTTCAGTCGTGAAGATCGAAGGCGAACAGCTCCCCGCCATCGATTTTCAGGATTTGTCCGTCAACGACAAGGTATTTGTTCTTCCTTCGATGATTTTCACCTTGTTCGTTGCATTAGTTGTTTGTTTTGATGGTTGGTGTGTAAAAGTCTCGAAATTTGGTGGTGGAAAGATTATATTTATATCTGATTTCTCTGATCTTCAGAGTGAAACGCGAAGTGAAACAGAGATCCTCCCGGTGGGATCTGAGAACCATGGGGGAATCTGTGCGATTTGCCTGGATAAGATAGTACTGCAGGAAACTGCTCTTGTTAAAGGTTGCGAGCATGCTTACTGTGTAACATGCATTCTTCAATGGGCCACGTATCGCCCCAAGGCCACCTGCCCGCAATGTAAACATCCATTTGAGTTTCTTAATGTCCATCGCTCCCTCGATGGCAGGCTTCATGACTATATGTTTGAGGAAAGTGTCTGCCTACTTCTTAGAGCTTCATGGTTTAAACCTTTAGATGTAGAAGATCATGCTGAGCATGAAGAAATGTATACGTATGATGACATCATTGAGGATTATTATTATGAATATGACGATGAGGAAGATGACTTAGATGAAGCTTATTATGGTGGCTCATCAAGCATCCGCATCGGTAACCGGAGATGGGGAGACAATGGCTATGTTAGGGCTGGTCGGCAACAAGCCAGGCCAGTCTATCAACCTAACTCCCAGAACTCAGGGGCAAGTTCATCATCCCGTGAGGCAAAGAACAAAGAGGTTGTCAAAGGAGCTACAACCGGACGACGAGCGAAACGAGCACAGAAACGAGAGGCGGCTGATGAGGCTGCTGCGGCAAAGCATCAGCAGCATCTAGTTAGGTTGGGAAGGAAGTGA 888 0.4572 MTSVVKIEGEQLPAIDFQDLSVNDKVFVLPSMIFTLFVALVVCFDGWCVKVSKFGGGKIIFISDFSDLQSETRSETEILPVGSENHGGICAICLDKIVLQETALVKGCEHAYCVTCILQWATYRPKATCPQCKHPFEFLNVHRSLDGRLHDYMFEESVCLLLRASWFKPLDVEDHAEHEEMYTYDDIIEDYYYEYDDEEDDLDEAYYGGSSSIRIGNRRWGDNGYVRAGRQQARPVYQPNSQNSGASSSSREAKNKEVVKGATTGRRAKRAQKREAADEAAAAKHQQHLVRLGRK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1542 295 MobiDBLite consensus disorder prediction 234 252 - -
Lele03g1542 295 Pfam Ring finger domain 90 133 IPR001841 -
Lele03g1542 295 ProSitePatterns Zinc finger RING-type signature. 108 117 IPR017907 -
Lele03g1542 295 SUPERFAMILY RING/U-box 89 139 - -
Lele03g1542 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 213 IPR013083 -
Lele03g1542 295 SMART ring_2 90 132 IPR001841 -
Lele03g1542 295 ProSiteProfiles Zinc finger RING-type profile. 90 133 IPR001841 -
Lele03g1542 295 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 73 295 - -
Lele03g1542 295 MobiDBLite consensus disorder prediction 231 295 - -
Lele03g1542 295 MobiDBLite consensus disorder prediction 253 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1542 Lele-ChrLele03 9696862 9699982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1542 69 295 C3H Transcription Factor Family AT5G19430 60.851 7.81e-80 241