Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1538 ATGACTGGAAAGCAGTGTTTGTTATCATTTGTTGAGGTAGATGGAGCTTGCTCTCATCTTAACCATAGAGTAGTCTGTGGTGGAGTAATTAAGGGCAGGGAGGGCAATGTCATTGACGGCTTCCAACTTAGGCTTCCTGCTGAATCAGGCAAATTACCATCGGAAGAGAATAAAGGATCTATGGAGAACAATAAGAAGAGAAAACTCAAAACACCTGCTCAGGTTTATGCTCTGGAGAAATTTTATAACGACCACAAATATCCCACTGAGGAAATGAAATCAGAACTTGCTGAGGTGTTGGGGTTGACAGAAAAACAAGTATCTGGATGGTTTTGCCATCGAAGGCTAAAAGATAAAAGGTTGTTGAAAGATGAAGCTTGTGCTAATGGGCGACAAGATATTTCAAGTGGTGTCATCCAAGATCATGGAAGTGGATTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAGGCATATTGATCCCAAAGAGGTTGAGAGTCATGGCCTTTACGGTGGTCGTGATCTTTTAGTTTCAGATACAGCCTATGAACGTAGGAATCATCATTCAGAAAATGTTTGTGCAATGGAAGACACATCATCTGAGAGAAGCTCATCTTTGCAAAATGAGGATTCATATGACGCTGAGCCTTCTGGGTATCGCACATCTGACGGAGCTCTGCCAACTAAAGTTCCCAAGCCTGCCACAAACACGAGATATAAACCATCAGGCTATCTTAAAGTAAAAGGAGAGATAGAAAACCCTGTTATAACTGCTGTTAAGAAGCAATTAGGAAGAAATTATCGGGAAGATGGTCCGCTTCTTGGTATAGAATTTGATCCACTTCCTCCAGAAGCATTCGAGTGTAAAATTGCAGATCCATTTCATGAAACATACTATATGGCAAATCGTGCTCCCTACTCTCCTGAAATTTCTGCTGTGAAAAGGCAACCCAGTCTTTGTGCTAGATATGATTCATATAATACCAAATTCAATTCCCAAGATTCACATATGGAAGGAGAAGACCTCTCTGATTTCCAGGATAAGAAACCTTACCAGCATTCAAAGCAAAGGCCACCTGTGTACAGTCATACCTTTCGATTTCCTAGCAGAAACTCTTCTCTCGATTTGTACGAACATTCTATTGGAGAAGCACCTGCATATAATAGCAAAAAGAATCGTAGAGTTGGCATCAAGCATGGCTTTGAAGGGTTGAAATCTGATTCTGCTTCTAATCATAGTGATCACTATGATGGTAACCATGCAGTAAACCCAAAAGATCCACTGTTGCATGGATATGATAACGTCAATACGAAGAATGTTCAGAGTGAATATGTAAAACTTGAGCCATCAAACTCGATCAGGAATCCTGTTTCTATGGATGCTAAGGATAGAGGAGGCCTATCCGGTAGGATGATAAAGGAAAAGAAGTCTGGTGAAAAAAGAAAGGCAAGAAAACAATGCGATGATCCAGATGGACTAAGGATGCTTTTGCACGAGGCTGCAAAACGTCTTGTTGATCCTCCTCTACAATATAATGTTATAGAAGAACATGTTGCTGAGATGCAACCACATAAAAGCCAGAGATCTTCCATAGAAGTGTCATCAAGCTTTAGTGAGGATGAAGCTGCGAATCTCAGCTCGTCTCTCGATGAAGCGATCGGTTTCCAGTGA 1680 0.4101 MTGKQCLLSFVEVDGACSHLNHRVVCGGVIKGREGNVIDGFQLRLPAESGKLPSEENKGSMENNKKRKLKTPAQVYALEKFYNDHKYPTEEMKSELAEVLGLTEKQVSGWFCHRRLKDKRLLKDEACANGRQDISSGVIQDHGSGLGQDSCGSTKHGDYRHIDPKEVESHGLYGGRDLLVSDTAYERRNHHSENVCAMEDTSSERSSSLQNEDSYDAEPSGYRTSDGALPTKVPKPATNTRYKPSGYLKVKGEIENPVITAVKKQLGRNYREDGPLLGIEFDPLPPEAFECKIADPFHETYYMANRAPYSPEISAVKRQPSLCARYDSYNTKFNSQDSHMEGEDLSDFQDKKPYQHSKQRPPVYSHTFRFPSRNSSLDLYEHSIGEAPAYNSKKNRRVGIKHGFEGLKSDSASNHSDHYDGNHAVNPKDPLLHGYDNVNTKNVQSEYVKLEPSNSIRNPVSMDAKDRGGLSGRMIKEKKSGEKRKARKQCDDPDGLRMLLHEAAKRLVDPPLQYNVIEEHVAEMQPHKSQRSSIEVSSSFSEDEAANLSSSLDEAIGFQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1538 559 MobiDBLite consensus disorder prediction 469 494 - -
Lele03g1538 559 SMART HOX_1 63 125 IPR001356 GO:0003677
Lele03g1538 559 MobiDBLite consensus disorder prediction 523 559 - -
Lele03g1538 559 CDD homeodomain 65 120 IPR001356 GO:0003677
Lele03g1538 559 MobiDBLite consensus disorder prediction 527 559 - -
Lele03g1538 559 MobiDBLite consensus disorder prediction 333 368 - -
Lele03g1538 559 Gene3D - 54 136 - -
Lele03g1538 559 MobiDBLite consensus disorder prediction 337 357 - -
Lele03g1538 559 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
Lele03g1538 559 MobiDBLite consensus disorder prediction 190 240 - -
Lele03g1538 559 MobiDBLite consensus disorder prediction 456 494 - -
Lele03g1538 559 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 48 553 - -
Lele03g1538 559 MobiDBLite consensus disorder prediction 199 218 - -
Lele03g1538 559 Pfam Homeodomain 65 120 IPR001356 GO:0003677
Lele03g1538 559 SUPERFAMILY Homeodomain-like 63 130 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1538 Lele-ChrLele03 9636191 9642958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1538 47 553 Homeobox Transcription Factor Family AT4G03250 38.795 1.84e-83 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele03g1538 Homeodomain 1e-16 CL0123