Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1536 ATGCTGAAGGAGATGGCTGAGAAGCTTCCTGCAGGGGAATCTAAGAATGTGAAATTTCCTTCTGTTGCTTCCTTCGAATCAAATCCTTCTTCTAATGAACTCATAAATACTTCTATTGATGGATTAAGCATGCAAGCTGCTAGCCCAGAACCAGACTTAACGGTACTGAACAACCAGTCACTTTCAAACGGATTAAATACCAACGGTAATCGAAGTGCAGGTCACAACAGCAAACAGAACCAGTCAGATGCAACGATTCGAAATGGGAGCAGAACAAAGGAAGGTGAGACTCGTGGTGAAGTTGGATGGGTTGAGCAAGATGAGCCTGGAGTATATATTACATTTACGTCCCTTGGAGGTGTCATAGATCTTAAGAGAGTTCGTTTCAGTCGAAGGCGGTTTAGTGAGAAGCAAGCCGAACAATGGTGGGCCGAGAATCGGGCAAGAGTATACGAGAAGTACAATGTACGCGTGACTGACAAGTCAGCCATGGATGAAGCAATCTGTAAATGA 513 0.4425 MLKEMAEKLPAGESKNVKFPSVASFESNPSSNELINTSIDGLSMQAASPEPDLTVLNNQSLSNGLNTNGNRSAGHNSKQNQSDATIRNGSRTKEGETRGEVGWVEQDEPGVYITFTSLGGVIDLKRVRFSRRRFSEKQAEQWWAENRARVYEKYNVRVTDKSAMDEAICK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1536 170 ProSiteProfiles BRX domain profile. 101 155 IPR013591 -
Lele03g1536 170 PANTHER PROTEIN BREVIS RADIX-LIKE 1 53 154 IPR044532 -
Lele03g1536 170 MobiDBLite consensus disorder prediction 20 88 - -
Lele03g1536 170 MobiDBLite consensus disorder prediction 1 99 - -
Lele03g1536 170 Pfam Unstructured region between BRX_N and BRX domain 24 94 - -
Lele03g1536 170 Pfam Transcription factor regulating root and shoot growth via Pin3 102 154 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1536 Lele-ChrLele03 9612096 9614178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1536 103 164 Major Intrinsic Protein MIP AT1G31880 50.794 1.47e-14 68.2