Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1532 ATGCATCATGGTTGTTCAATTCCTATTGTTCATCGAGATATATCAAGCAAAAATGTTCTTCTAAGATCTGAATATGAAGAAGCTTGCATTATTGATTTTGGAACGGCAAAGTTTTTGAATCCTAACTCAAACAATATGACCGCATTTGTTGGCACTTTCGGGTATGCTGCACCAGAGATTGCTTTCATTATGAAAGCAAACCAGAAATGTGATGTATACAGCTTTGGAGTGTTGACCTTAGAAATCATTATGGGAAATCATCCAGCAGAGCTTGTTTCATCTTTGGCAGAGAATTCAACCACTATTGATCTGTTGTTAAAGGATGTGTTGGACCCACGACTTTCTCCACCCACAAAACCAATCCTAGACAATGTGATCTTAGTTGCAAAAATAGCTTTTTCTTGCTTGCATGAGACTCCTCAGTCCCGTCCAACCATGGAACAAGTATCTAAGGAGCTTGCAAGGACACCAAAGTCTTATTCAGAGGATCAATTTCATACCATCACAATTGGACAACTAATGATGGATTGA 531 0.3861 MHHGCSIPIVHRDISSKNVLLRSEYEEACIIDFGTAKFLNPNSNNMTAFVGTFGYAAPEIAFIMKANQKCDVYSFGVLTLEIIMGNHPAELVSSLAENSTTIDLLLKDVLDPRLSPPTKPILDNVILVAKIAFSCLHETPQSRPTMEQVSKELARTPKSYSEDQFHTITIGQLMMD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1532 176 Pfam Protein kinase domain 8 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1532 176 SUPERFAMILY Protein kinase-like (PK-like) 1 153 IPR011009 -
Lele03g1532 176 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele03g1532 176 PANTHER LEUCINE RICH REPEAT KINASE 2 1 156 - -
Lele03g1532 176 SMART serkin_6 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1532 176 Gene3D Transferase(Phosphotransferase) domain 1 1 171 - -
Lele03g1532 176 ProSiteProfiles Protein kinase domain profile. 1 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1532 Lele-ChrLele03 9567109 9567726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1532 1 158 Receptor kinase-like Gene Family AT5G65700 41.765 3.14e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele03g1532 Pkinase 5.3e-22 CL0016