Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1529 ATGCACCATGGTCTCTCATGTCCCATAGTTCATCGTGACATATCAAGCAAGAACATCCTGTTAGATTCAGAATATCAAGAAGCTCATATCACTGACTTTGGAATAGCCAAGTTTCTAAAGCTTGACTCCAACAACATGACCTCATTCGCAGGCACTTATGGCTATGCTGCTCCAGAGATTGCTTATACAATGCAAGCAAATGAGAAATGTGATGTCTACAGTTTTGGTGTTCTCACATTAGAAATTCTAATGGGAAGACATCCAGGAGAGTTCATTTGTTCTTTAGCAGAGAACCCAATATCCTATGATTTGCCATTTAAGGATGTGTTAGATCAGCGACTTCCTCCACCCTCAAACCTATTTGCCGAGGAAGTAATGCTAATTTCAAAAATAGCACTTGCTTGCTTGAATGAAAATCCACAGTGCCGACCGTCCATGGAACAAGTATCGTTAAAACTTGTGAGGCCTAAACCTTATTCGTCGAACCAGTTCGACAACATCACACTTGGACAACTGATGAGAGCTTAA 528 0.4091 MHHGLSCPIVHRDISSKNILLDSEYQEAHITDFGIAKFLKLDSNNMTSFAGTYGYAAPEIAYTMQANEKCDVYSFGVLTLEILMGRHPGEFICSLAENPISYDLPFKDVLDQRLPPPSNLFAEEVMLISKIALACLNENPQCRPSMEQVSLKLVRPKPYSSNQFDNITLGQLMRA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1529 175 SMART serkin_6 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1529 175 SUPERFAMILY Protein kinase-like (PK-like) 1 150 IPR011009 -
Lele03g1529 175 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele03g1529 175 PANTHER LEUCINE RICH REPEAT KINASE 2 1 159 - -
Lele03g1529 175 Pfam Protein kinase domain 6 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1529 175 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1529 175 Gene3D Transferase(Phosphotransferase) domain 1 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1529 Lele-ChrLele03 9492903 9493522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1529 1 149 Receptor kinase-like Gene Family AT5G65700 45.283 1.42e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele03g1529 Pkinase 1.7e-22 CL0016