Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1518 ATGAAGAACAATAATTCTCAGCAGAGAACCGGCGTCCGGCAGTACCACAAATCCGAGCTTCCCCGGCTCCGGTGGACGCCGGAGCTCCACCAACAATTCGTTGAAGCTGTTGAAACTCTCGGTGGTCAAGATAAGGCAACACCGAAGCGTATTTTGCAGATGATGCGTGTGAAAGGATTGAGGATCTCGCACCTTAAAAGCCATCTTCAGAGATCTGAAGATTTTATTGTGTCATATGCTTTTCCTATTATGAGATATATATATCAGAGAGAGCGCAGAAACATGAAGTTACATTCCATTCATCATCATCAATCACATGAAGGAAAAGCTCAAGCTCGTGCTAATGATAACCATATCTGCTCCATTTGCTTACCCCAAAGATCGCCAGGAGCAAAAGTTTTCACGTCAAAATATAGCAATAATGTGAGGGGAGAATTGCATCTGTTAGATATCAAAGGCCTTTCACAAAGCAGTGAAGAAATTTATTATGATCTCAATCAGGAGCCTCATACAACGACATGTACAGAAAATAGTGGGACAGCTCCATTTAGTGACCACTCAGTCTCTTTTGATCGCTCACATCTGCTTCCCGTAAATATCATGCAGAGTGTGCAAAACGAAGACGACGAAGGCGAAGACGAAGAGAATCAAGTCATTCATGACTCGACTGGTTCATCAATTCAGTCTTTTGGAGGGAATTACATAAACTTAGACCTAACTATATGA 726 0.4229 MKNNNSQQRTGVRQYHKSELPRLRWTPELHQQFVEAVETLGGQDKATPKRILQMMRVKGLRISHLKSHLQRSEDFIVSYAFPIMRYIYQRERRNMKLHSIHHHQSHEGKAQARANDNHICSICLPQRSPGAKVFTSKYSNNVRGELHLLDIKGLSQSSEEIYYDLNQEPHTTTCTENSGTAPFSDHSVSFDRSHLLPVNIMQSVQNEDDEGEDEENQVIHDSTGSSIQSFGGNYINLDLTI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1518 241 Gene3D - 20 74 - -
Lele03g1518 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Lele03g1518 241 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 21 71 IPR006447 GO:0003677
Lele03g1518 241 SUPERFAMILY Homeodomain-like 21 71 IPR009057 -
Lele03g1518 241 FunFam Two-component response regulator 16 73 - -
Lele03g1518 241 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Lele03g1518 241 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 107 - -
Lele03g1518 241 MobiDBLite consensus disorder prediction 206 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1518 Lele-ChrLele03 9370870 9375987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1518 11 70 G2-like Transcription Factor Family AT1G14600 70.000 4.06e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele03g1518 Myb_DNA-binding 6.4e-07 CL0123