Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1516 ATGCTTAATTTTCTGATTGCAAGATTATCTGTGTCACCAACATGCAAGAGGAGGCACCATTTAGGTTTTCTCCTTCGCAATGCTTCCCACATTTTCAATTCGTTTTCTTCTGCAGGGCAATCATCTGAATCTACTCTATCCAAGCAAAATCAAGAGGGACATGAATCGTTGACTGTTTCTTATCTCATTAACTCTTGCGGCTTGTCCCCCAAAGTAGCTGTCCAAATTGAAGCTTCCAATAGGATTAAATTGAAAGACCTAGATAAAGCCGATTCAGTACTTAATATTTTCAGGAGTTATGGATTTTCAGAGACCCATATTTCCAAAGCAGTAAGAAATTGTCCGCCACTGCTTCGGATGAATCCGGAGATCCTTCTGCCCAAACTCGGGTTTCTCGAAACTTTTGGTTTATCTAGGTCCGAGCTCCCAGAAATCCTCTCTCATAGTTCTGTACTGTTAAGGTGGAGTCTGGAGAAATGTTTGATCCCCCGTTTTGAGGTCCTTAAGAGTGTTCTTGATAATGATCATGAGAAACTGTCAATAGCCATAAGACGCTGCGGATGGATTTTTCTTCAACAGGATGTGAGTAATGTAGTTCCAAACACGAAGGTTTTGAGAGAACATGGAGTGCCCCAATCGTCTGTCATTCAACTTGTAACTAATTATGCTGGGCTTGCCTTTATGAAGCCTGCAAAGTTTGCTGAGCATGTCAACTTTGCTAAGGAAATAGGAATTGAACCATTTAGGCTAACGTTCCTCCAGGCACTTTATGTGTTAGCATCAACGAGGAAATCGACTTGGAAGTCAAAGCTTGATGCATTTGGCAGGTGGGGCTGGTCCAAGGATATGACTCTTTTTGTTTTCAGAAAGTATCCATTTTGTATGACGCTGTCAGAGGATAGAATTGCAAACTCGATGAAGTTTCTTGTGGATGAAATGAGTCTGACATTTGAAGACACAGCAAGATGCCCATCGCTTCTTGGCTATAGCTTGGAGCAAAGGATTGTTCCTAGATGGTCAGTAGTTAAAACTTTGAAAATGAATGGTTTGTTAAAAGAAAATGTGTCACCAAGGACCATTTTTGTAGCAAGTGAGAAACAGTTTCTAGAGAAATTTGTGATCAGATTTCAAGGAAGTTGTCCTCAGCTTTTGAACATTTATAAAGATTCAAAAGCATCAGTGCCTAAAGTTCAGTGA 1197 0.4043 MLNFLIARLSVSPTCKRRHHLGFLLRNASHIFNSFSSAGQSSESTLSKQNQEGHESLTVSYLINSCGLSPKVAVQIEASNRIKLKDLDKADSVLNIFRSYGFSETHISKAVRNCPPLLRMNPEILLPKLGFLETFGLSRSELPEILSHSSVLLRWSLEKCLIPRFEVLKSVLDNDHEKLSIAIRRCGWIFLQQDVSNVVPNTKVLREHGVPQSSVIQLVTNYAGLAFMKPAKFAEHVNFAKEIGIEPFRLTFLQALYVLASTRKSTWKSKLDAFGRWGWSKDMTLFVFRKYPFCMTLSEDRIANSMKFLVDEMSLTFEDTARCPSLLGYSLEQRIVPRWSVVKTLKMNGLLKENVSPRTIFVASEKQFLEKFVIRFQGSCPQLLNIYKDSKASVPKVQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1516 398 SMART mt_12 29 69 IPR003690 GO:0003690|GO:0006355
Lele03g1516 398 SMART mt_12 317 348 IPR003690 GO:0003690|GO:0006355
Lele03g1516 398 SMART mt_12 143 175 IPR003690 GO:0003690|GO:0006355
Lele03g1516 398 SMART mt_12 108 138 IPR003690 GO:0003690|GO:0006355
Lele03g1516 398 SMART mt_12 180 211 IPR003690 GO:0003690|GO:0006355
Lele03g1516 398 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Lele03g1516 398 FunFam Mitochondrial transcription termination factor-like 166 380 - -
Lele03g1516 398 Gene3D Transcription termination factor 3, mitochondrial 149 377 IPR038538 -
Lele03g1516 398 PANTHER CGI-12 PROTEIN-RELATED 53 374 IPR003690 GO:0003690|GO:0006355
Lele03g1516 398 Pfam mTERF 94 307 IPR003690 GO:0003690|GO:0006355
Lele03g1516 398 Pfam mTERF 264 369 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1516 Lele-ChrLele03 9363220 9364416 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele03g1516 mTERF 2.7e-24 No_clan