Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1510 ATGCTAATTTTTCTGATTGCAAGATTATCTTCTTCGCGGCGGACGGGAACCCAGTTAGGGTTTCTTCATCACTATGCATCCCACATTTCCTATTCGTTTTCTTCCATTGCGAAATTATTTCAGTCAAATCGACCAGATGGAAATCATTTGTTTACGGTTTCTTACCTCGTGAACTCATGTGGCATGTCCGCCAAAGTTGCTAATGAGGTATCTAAAAGGGTTGAACTGAGAGACTCAGATAAGCCCGATGCCATACTTAATCTTCTCAGAAGCTATGAATTCTCAGATGCACAAATATCCAAAATTGTGACATGCTATCCTCGGGTGCTTTCTTCTAATCCTGAGCTCAATCTTTTGCCCAGGCTAAGGTTTATGCAGTCTATAGGGTTTTCAGCTTCTGAAATCCCAGAACTCTTGTCCTATAACCCTGCATTATTATTTTATAGCTTAGAGAAACGTATAATTCCCCACTATGAGGCCCTTAAAAGTGTACTTGGTGATACTTGGAAAGTAAGAAAATGTTTTAAAAGCTCGAGGTGGCATGTCCGCTCCTATGATGTGACGAATATAGTTCCCAACATAAAATTTTTGAGAGAGGAAGGAGTTCCTCAACCTCTTGTCTTTTCTCTGTTATGTAGACGTGCAGATATAACATTTATGAATCACTCAATGTTTGTTGAACATGTCAAATTTGTCAAGAAAATAGGAGTTGAACCTTTCAAGTTTGCGTTTGTTGAAGCGCTTATAGTTGTAACACAGTTGAGTAAATCAACCTGGGAGTTGAAACTGGATATCTTTGAGAGATTAGGCTGGTCCAAATATGTCACTCTTTTGGCATTCAGTAAGGTCCCAAATATCATGTTTATGTCAGAGACAAATATCACAAACACAATGAAGTTTTTTACAGAAGAAATGGGTGTTCCGTTGGAAGTTATAGCTGGATGCCCGAATATTCTTAGATATAGCTTGAAGAAGAGAATTGTTCCTAGATGTTCAGTAGTGAAGATTTTGAAAATGAAGGGTTTAATCAAGGATAATTTGTCCCTACCTTTCATCATTATTATGGCTGAGAAGAAGTTTCTGGAAGATTTTGTGATTAAATTTAAGGGCAGTGTTCCTCAGCTACCGAAACTCTATAGTGGTGAATTGGGACCTTTACCTGAAGTTCTGGCGTAG 1176 0.3844 MLIFLIARLSSSRRTGTQLGFLHHYASHISYSFSSIAKLFQSNRPDGNHLFTVSYLVNSCGMSAKVANEVSKRVELRDSDKPDAILNLLRSYEFSDAQISKIVTCYPRVLSSNPELNLLPRLRFMQSIGFSASEIPELLSYNPALLFYSLEKRIIPHYEALKSVLGDTWKVRKCFKSSRWHVRSYDVTNIVPNIKFLREEGVPQPLVFSLLCRRADITFMNHSMFVEHVKFVKKIGVEPFKFAFVEALIVVTQLSKSTWELKLDIFERLGWSKYVTLLAFSKVPNIMFMSETNITNTMKFFTEEMGVPLEVIAGCPNILRYSLKKRIVPRCSVVKILKMKGLIKDNLSLPFIIIMAEKKFLEDFVIKFKGSVPQLPKLYSGELGPLPEVLA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1510 391 Pfam mTERF 86 296 IPR003690 GO:0003690|GO:0006355
Lele03g1510 391 Pfam mTERF 252 361 IPR003690 GO:0003690|GO:0006355
Lele03g1510 391 Gene3D Transcription termination factor 3, mitochondrial 170 369 IPR038538 -
Lele03g1510 391 PANTHER CGI-12 PROTEIN-RELATED 49 366 IPR003690 GO:0003690|GO:0006355
Lele03g1510 391 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Lele03g1510 391 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Lele03g1510 391 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Lele03g1510 391 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Lele03g1510 391 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Lele03g1510 391 SMART mt_12 136 168 IPR003690 GO:0003690|GO:0006355
Lele03g1510 391 FunFam Mitochondrial transcription termination factor-like 150 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1510 Lele-ChrLele03 9332070 9333245 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele03g1510 mTERF 2.6e-25 No_clan