Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1505 ATGGAGGATGAAAGTAAGGTGATGAATAACAGCATGATGAGGTCATCAGGAGGAGGAGGAGAAGAAGAAGAAGACGATGAAGGAGGGAAGCTTCCAGGGTTCAGATTCCATCCAACAGATGAAGAACTGGTAGGTTTTTATCTGAGAAGGAAGGTGGAGAAGAAAACTCTTCGAATCGAACTCATCAAACACATTGATATCTACAAATACGATCCCTGGGATCTCCCAAAGGCAAGCGGGATCGTAGGGGAGAAGGAATGGTACTTCTTCTGCAAGAGAGGGAGGAAATACAGAAACAGCATCAGGCCAAACAGGGTCACTGGCTCTGGCTTCTGGAAAGCCACGGGAATTGACAAGTCCATTTACAATAATGCCCTCACCCAATGCATTGGCCTCAAGAAGTCCCTCGTCTATTACAGGGGCGCTGCTGGTAAAGGCACCAAGACTGATTGGATGATGCACGAGTTTCGCCTCCCTCCTAATAATAACCCTACCACCACCACCACCAATCATCTTCAAGAAGCTGAAGTGTGGACACTTTGCAGAATATTCAAACGAATCCCATCCTACAGAAAATACACACCAACTTCCAAAACTACAGCAATAGCTACAAATTCAAGCAATTCGAAAACATTAGAATTTGACAAATACAATGACAGCAACAAGCCTTACGACTCGACTTGTTTAAGATCATCGTTGTCGTCATCAAACTCTATTATTACTCATCATCTTGAAAGAAAATTACCAGTTCTTAATGATGAAAGAAGCCACTTTTTTCTGGGTCAGCTTGCTGCTCATCATCAAGCTCCTTCATCAACGGTGACTAATAATATTAGTTATTATAACCACAGCTTCTTGAATCATCAGAATGTGGAAGATGTGCTTGCTAATGGTAATTGGGATGAACTCAGATCTGTCATTCAGTTTGCTGCTGATCATTCCACTGTTTCATGA 954 0.4256 MEDESKVMNNSMMRSSGGGGEEEEDDEGGKLPGFRFHPTDEELVGFYLRRKVEKKTLRIELIKHIDIYKYDPWDLPKASGIVGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKSIYNNALTQCIGLKKSLVYYRGAAGKGTKTDWMMHEFRLPPNNNPTTTTTNHLQEAEVWTLCRIFKRIPSYRKYTPTSKTTAIATNSSNSKTLEFDKYNDSNKPYDSTCLRSSLSSSNSIITHHLERKLPVLNDERSHFFLGQLAAHHQAPSSTVTNNISYYNHSFLNHQNVEDVLANGNWDELRSVIQFAADHSTVS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1505 317 Gene3D NAC domain 39 189 IPR036093 GO:0003677|GO:0006355
Lele03g1505 317 MobiDBLite consensus disorder prediction 1 34 - -
Lele03g1505 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 29 266 - -
Lele03g1505 317 SUPERFAMILY NAC domain 30 185 IPR036093 GO:0003677|GO:0006355
Lele03g1505 317 ProSiteProfiles NAC domain profile. 30 186 IPR003441 GO:0003677|GO:0006355
Lele03g1505 317 Pfam No apical meristem (NAM) protein 32 158 IPR003441 GO:0003677|GO:0006355
Lele03g1505 317 FunFam NAC domain-containing protein 35 39 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1505 Lele-ChrLele03 9289972 9294658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1505 31 247 NAC Transcription Factor Family AT5G39820 51.073 2.33e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele03g1505 NAM 1.7e-35 No_clan