Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1494 ATGGCGAATGAGAAGGATCATTACTACGATCAGTATGATCTCAATACTTTCTATTACAACCATCACCAGAACCTTGTTCAAGGGTTCGATCATCATCATCCTCCTTCTAATTCACAGGGAACGGCGAGCTTCACAGATTGCTTGAATGGTGGGTTCATGGACTATAATGTTCTCTCAAGAGCCTTTGACTTGTCTTGTTCATCAGCATCTGAAGTGATCTCCTCCTCAATTAACGGCGGCGGCAGCGGCGATGAGCTCATCAATCCAAAGAATAAGCCGCCGCCATCATCATCAGCTGGCGCAGCCGCCACTAGTCCTACGACCACTGTCACAGATTCTCAAGTGATGGGCCTCAATAATTCCTCTGTGTCGAATTCATCTTCCAATAATGAAGCAGAAGAAGCAGTGATAACAGAAGAAGACTCAGCCAAAAGCTTCAAGAAAGAGAAGAAGGACCAAGATGCAGAAGAAATGTCCAAGAAAGAGAACAAGACAAAAGGGAATAATAAGAAAGAGAAAAAGGCAAGAGAACCGCGTTTTTCGTTCTTGACTAAAAGTGAGGTGGATCACTTAGAAGATGGATACAGATGGAGGAAATATGGACAGAAAGCCGTCAAGAACAGTCCTTACCCAAGGAGTTATTATAGATGCACAAGTCAAAAGTGCAATGTGAAGAAGAGAGTGGAGAGGTCATTTCAGGATCCATCAATTGTGGTGACGACATATGAAGGGCAGCACAACCACCATTGTCCGGCGACACTCCGGGGAAGCGCCAACGCCGCCATGATGTTATCATCCGCGGCGATGGCGGGATCGCCTAATTCCCTTTTCGGTTCTTCGCCGATGGGGAGAACGACAGCCATGTTACCCCAGGAACTTCTTGCTCAGTTTCTTCCAAGTTATCAAGGTGATGATCATCTTCATCATCATCACCAACAAAACCATCCCATGTTCCACCAAAACCCTAATAATAATAATACAAATCATCGTCACCAGCAAGTCCCTCATGACCATGGCTTGTTGCATGACCTGTTACCTCCTTCTTCTTCATCCTTCCCTGGTAGACAACAACAACAAGAGCCATGA 1086 0.4549 MANEKDHYYDQYDLNTFYYNHHQNLVQGFDHHHPPSNSQGTASFTDCLNGGFMDYNVLSRAFDLSCSSASEVISSSINGGGSGDELINPKNKPPPSSSAGAAATSPTTTVTDSQVMGLNNSSVSNSSSNNEAEEAVITEEDSAKSFKKEKKDQDAEEMSKKENKTKGNNKKEKKAREPRFSFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCNVKKRVERSFQDPSIVVTTYEGQHNHHCPATLRGSANAAMMLSSAAMAGSPNSLFGSSPMGRTTAMLPQELLAQFLPSYQGDDHLHHHHQQNHPMFHQNPNNNNTNHRHQQVPHDHGLLHDLLPPSSSSFPGRQQQQEP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1494 361 MobiDBLite consensus disorder prediction 137 178 - -
Lele03g1494 361 MobiDBLite consensus disorder prediction 91 133 - -
Lele03g1494 361 Gene3D WRKY domain 177 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele03g1494 361 MobiDBLite consensus disorder prediction 303 361 - -
Lele03g1494 361 Pfam WRKY DNA -binding domain 192 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g1494 361 SUPERFAMILY WRKY DNA-binding domain 184 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele03g1494 361 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 322 IPR044810 GO:0003700
Lele03g1494 361 Coils Coil 129 149 - -
Lele03g1494 361 MobiDBLite consensus disorder prediction 316 330 - -
Lele03g1494 361 FunFam WRKY transcription factor 57 177 251 - -
Lele03g1494 361 SMART WRKY_cls 191 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g1494 361 MobiDBLite consensus disorder prediction 77 178 - -
Lele03g1494 361 ProSiteProfiles WRKY domain profile. 186 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1494 Lele-ChrLele03 9215822 9217722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1494 41 256 WRKY Transcription Factor Family AT4G18170 52.511 4.83e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele03g1494 WRKY 1.3e-25 CL0274