Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1489 ATGGATGAACCACTTATTCTCTCCAACAAACGAGGAGTGGTCGCAGAATCATCAAGCAGGCCAGCATCCCTAAGAGAGCTTAACTCATCTTATATTGATCTTATCACCAATGAAGAAATCATTCAGATCATTACCACACCCAAGAATAGCCCTTCTTATTTGAACCTCATAGCCAACTTGAACAGAAGAAAGAAGATCATCCATCGCTCGCACTCTGCTCCATCAGTTTTCACTGATGTCAGAGGAAATGGTCACGATTCCATTGACCTCAGAATTTCACAGAAAACATCACCTGCAATAGTAAGGTTATCCTTTATTGGTGTCATCTTGTATGTGGCAACTGGGGTTTTAGTTTACTTGTTAAGTGGGAGTTTCAAGGGCAAATCCACTTACAAGCCTGTGGATGCTGTGTACTTCACAGTGGTAACTCTCTGCACAATAGGATATGGTGATATTGTCCCAGACACAGCATTCACCAAAATCTCTACCTGTGGGTTCATTCTGGTGGGTTTCGGATTCGTCGGCATTCTGCTGAATGGCTTAGTCACCTACGTTTGTGATAGACAAGAGGAAATGTTACTGAGTGCCATGGATGAGAATAGATTCAATACACTAGTTAGATCATATATGATAGACAAAGAGAAAGGAAGAATGAGGATAAGAACCAAAGTGTGTCTATCTTTGGCAGTGGTTGTCTGTTGCATTGCTATAGGAACAATTTGTGCTCGCTACCTTGAGAACTTGGATTGGCTGGACAGTTTTTATCTCTCTGTTACTTCTGTTACAACAGTGGGCTATGGCGATTATGCTTTTACTGCTGAGTGGGGAAGGGTTTTTGCATCATTATGGCTCTTGGTGAGCACATTGGCTGTCGGCAGGGCCTTTCTGTACCTAACTGAATACTGTATTGACAAGAGAAACCGTACCATTGCAAAATGGATTCTTCACAAGAAGATTACCTTGTCAGATTTAGTGGCCGCTGACCTTGACAACGATGGATCAATCAGCAAGTCTGAATTTGTCATATATAAGCTTAAGGAGATGGGGAAGATATCTGAGAATGACATTCTACAAATAGGCAAACAATTTGACACATTGGACAGTAGCCAATGTGGCAAGATTACTCTTGCTGACCTAATGGAAACTGCCTAA 1152 0.4175 MDEPLILSNKRGVVAESSSRPASLRELNSSYIDLITNEEIIQIITTPKNSPSYLNLIANLNRRKKIIHRSHSAPSVFTDVRGNGHDSIDLRISQKTSPAIVRLSFIGVILYVATGVLVYLLSGSFKGKSTYKPVDAVYFTVVTLCTIGYGDIVPDTAFTKISTCGFILVGFGFVGILLNGLVTYVCDRQEEMLLSAMDENRFNTLVRSYMIDKEKGRMRIRTKVCLSLAVVVCCIAIGTICARYLENLDWLDSFYLSVTSVTTVGYGDYAFTAEWGRVFASLWLLVSTLAVGRAFLYLTEYCIDKRNRTIAKWILHKKITLSDLVAADLDNDGSISKSEFVIYKLKEMGKISENDILQIGKQFDTLDSSQCGKITLADLMETA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1489 383 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 131 357 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele03g1489 383 FunFam Two-pore potassium channel 2-like 99 195 - -
Lele03g1489 383 PRINTS Two pore domain K+ channel signature 142 170 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele03g1489 383 PRINTS Two pore domain K+ channel signature 262 271 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele03g1489 383 SUPERFAMILY Voltage-gated potassium channels 96 185 - -
Lele03g1489 383 SUPERFAMILY EF-hand 326 381 IPR011992 -
Lele03g1489 383 ProSitePatterns EF-hand calcium-binding domain. 328 340 IPR018247 -
Lele03g1489 383 Pfam Ion channel 108 185 IPR013099 -
Lele03g1489 383 Pfam Ion channel 230 301 IPR013099 -
Lele03g1489 383 FunFam Two-pore potassium channel 2-like 202 326 - -
Lele03g1489 383 Gene3D - 97 193 - -
Lele03g1489 383 Gene3D - 194 324 - -
Lele03g1489 383 Gene3D - 325 383 - -
Lele03g1489 383 SUPERFAMILY Voltage-gated potassium channels 212 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1489 Lele-ChrLele03 9187796 9189493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1489 67 381 Ion Channels AT4G18160 52.215 3.35e-107 320