Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1479 ATGGAAAGGGATAATCATCAAGAACAAGATCATAAGGGGATGAATCAAACTAGCGGGCCCAGCATTAATGATGTCCCAAAAGCTGTTTCTCCAGTTTCTTTTGCAGCTACTACTGATCAGGAAGAAACCGTCCGCCGACCCCGTGGACGGCCAGCCGGATCCAAGAACAAACCGAAGCCACCGATTATCGTCACTAGGGATAGCGCAAATGCCCTAAGGGCTCATGCACTGGAAGTGACTTCTGGGTGTGATATCAATGAAAGTTTGCTCAACTTTGCAAGAAGAAAGCAGCGAGGGATTTGCATACTCAGTGGAACTGGTTGTGTTACAAATGTAACACTTCGTCAGTTAGCTTCTTCTGGTGCAACAGTGACACTTCATGGTAGGTTTGAGATTCTCTCCCTTCTGGGGTCAATTCTTCCACCGCCGGCTCCTCCGGGGATCACCGGACTGACGATTTACCTTGGCGGAGCTCAAGGGCAGGTTGTAGGAGGTGGTGTGGTTGGTGCTCTGGTTGCTTCTGGGCCTGTGGTGATTATGGCTGCTTCGTTCATGAATGCTACTTTTGATCGTCTTCCATTAATGGAGGACGATGAGATTATTGCTCAGAATCATCAGCATTACCAGAATAATGGTCGAAGTCATCATCATCATCATCTTCATCATCACCACCTTGATGCCTCAGATTTATATGGAATGCCTCAGAACTTGCTCACCAATGGCACAATCCCTCCTGAGATATATTCATGGACTACTCCTGGCCGTAACTTCTCAAAAGCTTGA 783 0.4738 MERDNHQEQDHKGMNQTSGPSINDVPKAVSPVSFAATTDQEETVRRPRGRPAGSKNKPKPPIIVTRDSANALRAHALEVTSGCDINESLLNFARRKQRGICILSGTGCVTNVTLRQLASSGATVTLHGRFEILSLLGSILPPPAPPGITGLTIYLGGAQGQVVGGGVVGALVASGPVVIMAASFMNATFDRLPLMEDDEIIAQNHQHYQNNGRSHHHHHLHHHHLDASDLYGMPQNLLTNGTIPPEIYSWTTPGRNFSKA 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1479 260 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 195 - -
Lele03g1479 260 CDD DUF296 73 155 IPR005175 -
Lele03g1479 260 Gene3D - 72 208 - -
Lele03g1479 260 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 14 215 IPR014476 GO:0003680
Lele03g1479 260 ProSiteProfiles PPC domain profile profile. 69 207 IPR005175 -
Lele03g1479 260 MobiDBLite consensus disorder prediction 1 63 - -
Lele03g1479 260 PIRSF ESCAROLA 1 259 IPR014476 GO:0003680
Lele03g1479 260 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 185 IPR005175 -
Lele03g1479 260 FunFam AT-hook motif nuclear-localized protein 72 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1479 Lele-ChrLele03 9107234 9108016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1479 5 259 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 64.314 2.52e-97 284