LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g1459	ATGGACCTGAATTTGAGTTGTATCAACCTGTTCATTATTCTTCTCTTAATTGCTTCCACTTCACAGCTATTTTTCTCACAATTTGCTTTAGCAGACACAGGCATTCTCGTCAGTGAAGAAGTTGAGACATTGAAGGAGATAGCGAGGAAAATAGGGAAGAATGACTGGGACTTTGAAAATGAGGATCCTTGCAGTGGGAAAGGGCAGTGGAATGCTTCTGATAAGGTCAAACACTTTGAGAGCATTGTGGACTGTAAATGTAACAAGTCTTCTTGCCATATTTTGTTTTTTCCACAAGAGAGAAAATCCTTGAAGGCTCAGAATCTTTCGGGTACTATCCCACCAGAATTTTCCAAGCTAAATCATCTCAAGAAATTGACCCTGAGTCTTAACGTTCTCAATGGTCCTATACCTGATCAATGGGCTAGCATGCAATTGGTTGACCTCTCGATTATGGGAAACAGATTGTCAGGTCCATTCCCCACAGTTCTCACGAACATCAAGACTCTCCAGACTCTGACTATTGAAGGAAATCAATTTTCAGGTCCCATTCCACCAAATATTGGAAAGTTGATCAAGTTAGAAAAACTCCATCTGACGTCAAATGCATTCACTGGGGAATTGCCAGCTGAACTTTCCAAGTTAAAGAATTTGACTGATTTGAGGATAAGTGACAATAACATCTCTGGGCGGATTCCTGATTCAATTGGTAAATGGACATTAATTAAAAAGCTGCACATGGAGGGTTGCTCTCTTGAGGGGCCCATACCTCCAAGCATTTCAGCCTTGACAAGCTTAAGTGATTTGAGGATAACTGACCTAAAAGGTGGAGCCTCTGATTTTCCATCCTTAAGTAAGATGAAATCCATGGAGAAATTGATATTGAGGAACTGTATGATTAAAGGGGAGATCCCAGAAGATATTGGGAGAATGGAAAACCTGACAACCTTATATCTTACTGGGAACAAGCTAGGAGGGACTATTCCTGACTGGGCCCTTGAATCAAACAAAAAACAAGTGTACGTAAACTCAAGTCCTGTTGAATGCCTGCAAGGGAGTGTAAGTAGAGTTAATCCATGCCCGAAAAGGAACTTCCCTTGTCCTGCTTCGACCAAGCAATATTTGCATACTGTTGTTTCTTCAACAGATCATCATTCATTGCATGTTAATTGTGGTGGTAACGAAGCAAATATCAATGATGCAATATATGAATCTGACGTAGAAAATAGAGGTGCTGCAGCGTTTTACTCCACCCAGAACTGGGCACTTAGCAGCACAGGAGACTTCATGGACAATCATGAAAACTCTGATAACTATATTCTGACCAATACTTCTACACTTCTCAATGTCTCTGTCATAGATTCACAACTGTACACAGCAGCTCGCATATCTCCTCTTTCTCTCACATATTATGGACTCTGTCTCTTAAATGGAAACTACACTGTGAAGCTTCACTTCGCGGAGATTTTGTTCTTGAATGATAGATCATATTACAGTCTTGGAAGGAGGATATTTGATGTCTACATCCAGGGGAATTTGGTCCTGAAAGACTTCAATATAGAAAGTGAAGCTGGTGGTGCTGGTAAGCCTGTTGTCAGGACATTCAATGCTACAGTCACCCAACATACCTTGAAAATTCACTTTTACTGGGCTGGAAAGGGCACAACAGGCATACCAAAACGAGGATATTATGGACCTCTAGTGTCTGCCATATCTGTGGATCCTAATCAATTTAATATGGTTTTACATAGAAGTTATCGAGCTGCTGTATATGAGATATCCAATGAAATGTTCTCAGTTGTTCTTTTAGCTTCAACCAAATCTATGAGCAACTTCCTTTGTACAGATTTTAAACCTCCATCCGGAGATAGAAAAAGAATTTATATAGTGCTGGGTAGCACAATAGCTGCTTTTGTAGTTCTTGTTCTTCTGGTCTTGGGCATCATGAGGAGGAAGGGCTGGCTAGGAGGCAATGATTCTATGTATAAAGATCTTAGAGGTTTGGATCTGCAGATGGGATTGTTTACATTAAGACAAATCAAGGCAGCAACTGGAAACTTCAATGCAGCCAACAAAATTGGGGAAGGTGGATTTGGCTCCGTTTACAAGGGTCTACTGCCAGATGGCACAGTAATTGCAGTGAAGAAGCTCTCCTCAAAATCTACGCAAGGAATCCGTGAATTTGTGAATGAGTTAGGAATGATATCTGGCCTTCAACATCCCCATCTTGTTAAGCTTTATGGATGTTGTGTGGAAGGAGACCAGTTAATGCTGATATATGAGTATATGGAAAACAATTGTCTGTCTCGTGTTCTTTTTGGGAAGGATCCAGCCTGCGACCGAGTGATATTGAACTGGTCAACTAGGAGGAAAATTTGCCTTGACTTTGGTTTTGCAAAACTCAATGAAGATGAAAATACCCATGTTAGCACTCGCATTGCAGGAACTATTGGAAAGAGTAATACAAATTTCAGACCCAATGAGCAATTCATTTTCCTCCTTGATTGGGCCAATGTTTTGCAAGAGAAAGGAAGGCTAATAGAGCTGATGGATCCAGATTTGGGTTCAGAATACTCAAGTGAGGAGGCCATGTTAATACTAAACGTGGCACTCTTATGTACCAATGCATCTCCTACACTTAGGCCAACAATGTCTCAAGTTCTGAGCATACTTGAAGGTAGAAGTAACATGCAGGATCATCATTCTGATCCGGGACAACAGCAAACAGCTAATAATCTCAAATATGAGGCCTTAAGAAGTCACAATCTAAGCCTCCGAGAAAGTATGTCAATTCATGGTCAATGTCCTGGTTCCTCTAGTTCAGGCGTTGAAGTAGAAGAGAAGCACCTTCTCGTAAATGTTAGCTCAGACTCAACTAAAGCAGACAAGTGA	2892	0.4084	MDLNLSCINLFIILLLIASTSQLFFSQFALADTGILVSEEVETLKEIARKIGKNDWDFENEDPCSGKGQWNASDKVKHFESIVDCKCNKSSCHILFFPQERKSLKAQNLSGTIPPEFSKLNHLKKLTLSLNVLNGPIPDQWASMQLVDLSIMGNRLSGPFPTVLTNIKTLQTLTIEGNQFSGPIPPNIGKLIKLEKLHLTSNAFTGELPAELSKLKNLTDLRISDNNISGRIPDSIGKWTLIKKLHMEGCSLEGPIPPSISALTSLSDLRITDLKGGASDFPSLSKMKSMEKLILRNCMIKGEIPEDIGRMENLTTLYLTGNKLGGTIPDWALESNKKQVYVNSSPVECLQGSVSRVNPCPKRNFPCPASTKQYLHTVVSSTDHHSLHVNCGGNEANINDAIYESDVENRGAAAFYSTQNWALSSTGDFMDNHENSDNYILTNTSTLLNVSVIDSQLYTAARISPLSLTYYGLCLLNGNYTVKLHFAEILFLNDRSYYSLGRRIFDVYIQGNLVLKDFNIESEAGGAGKPVVRTFNATVTQHTLKIHFYWAGKGTTGIPKRGYYGPLVSAISVDPNQFNMVLHRSYRAAVYEISNEMFSVVLLASTKSMSNFLCTDFKPPSGDRKRIYIVLGSTIAAFVVLVLLVLGIMRRKGWLGGNDSMYKDLRGLDLQMGLFTLRQIKAATGNFNAANKIGEGGFGSVYKGLLPDGTVIAVKKLSSKSTQGIREFVNELGMISGLQHPHLVKLYGCCVEGDQLMLIYEYMENNCLSRVLFGKDPACDRVILNWSTRRKICLDFGFAKLNEDENTHVSTRIAGTIGKSNTNFRPNEQFIFLLDWANVLQEKGRLIELMDPDLGSEYSSEEAMLILNVALLCTNASPTLRPTMSQVLSILEGRSNMQDHHSDPGQQQTANNLKYEALRSHNLSLRESMSIHGQCPGSSSSGVEVEEKHLLVNVSSDSTKADK	963

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g1459	963	Gene3D	-	382	576	-	-
	Lele03g1459	963	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	384	576	-	-
	Lele03g1459	963	SUPERFAMILY	Protein kinase-like (PK-like)	673	904	IPR011009	-
	Lele03g1459	963	FunFam	Probable LRR receptor-like serine/threonine-protein kinase RFK1	42	208	-	-
	Lele03g1459	963	FunFam	Putative LRR receptor-like serine/threonine-protein kinase isoform A	209	275	-	-
	Lele03g1459	963	MobiDBLite	consensus disorder prediction	930	963	-	-
	Lele03g1459	963	SUPERFAMILY	L domain-like	104	349	-	-
	Lele03g1459	963	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	19	794	-	-
	Lele03g1459	963	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	657	762	-	-
	Lele03g1459	963	Gene3D	Transferase(Phosphotransferase) domain 1	818	918	-	-
	Lele03g1459	963	Pfam	Malectin domain	386	571	IPR021720	-
	Lele03g1459	963	ProSitePatterns	Protein kinases ATP-binding region signature.	693	716	IPR017441	GO:0005524
	Lele03g1459	963	Pfam	Protein tyrosine and serine/threonine kinase	690	775	IPR001245	GO:0004672\|GO:0006468
	Lele03g1459	963	Gene3D	Phosphorylase Kinase; domain 1	659	762	-	-
	Lele03g1459	963	Gene3D	Ribonuclease Inhibitor	212	354	IPR032675	-
	Lele03g1459	963	Gene3D	Ribonuclease Inhibitor	40	211	IPR032675	-
	Lele03g1459	963	ProSiteProfiles	Protein kinase domain profile.	687	963	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g1459	Lele-ChrLele03	8900871	8910836	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele03g1459	10	904	Receptor kinase-like Gene Family	AT1G53440	42.463	0.0	724

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Lele03g1459		Malectin	4.9e-43	CL0202