Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1448 ATGGCTCCCGGTTTTGTATTCGAAGCTCCCAGCGACGAAGAAATCGAGCGCTCTGATTTTGAAAACGAAGAACAGGAACAAAGCCAAGAAGAGGAAGCAGAGGAGCAGAGTGATTATGATAACGATGATGACGATGACGATGACGATGAAGAAGAAGGAGAAGAAGAAGAAGAAAGAGCTCGAGTTTCGAATAAGAAATCTCAATCCCCATGGGACTTCGCGAAGTACTCTGAATCCGTCGCAGAGGAACATGCCCGACGAAGCACAACCTCGTTGGATCAGAAAATTGCCAAAGCCATTAAAGAACGCTCCACCGAGCTCAGAAAGCCCGTTGAAGACGATCAGGAGAGCTCGGAGTCCGAATCCGACAAACAAGAGGATTATAGACCAGAAGAGGAAGAAGATGAAGATGGAACTGTAGGCGAGAGCAAGTCTTTCTTCGCTCCATCTGACGGAGCTTCATTCCATGCTGATTCATTCATGGAGCTTAATTTGTCGCGTCCTCTGCTCCGGGCTTGTGAGGCCTTAGGATACGTTAAACCGACACCAATTCAGGCAGCGTGTATACCACTTGCATTGACTGGTCGTGATATATGTGGAAGTGCCATTACCGGTTCTGGGAAGACAGCTGCATTTTCACTGCCTACTCTGGAGAGGCTTTTGTATCGCCCAAAACGTGTGCAGGCCATAAGAGTCCTCATTCTTACCCCAACCAGAGAATTGGCGGTCCAAGTTCACAGTATGATAGAGAAGCTTGCTCAGTTTACTGATATAAGATGTTGCCTGGTCGTTGGGGGTCTGTCTACAAAGGTGCAAGAGGCGGCCTTGAGATCTATGCCGGATATTGTTGTTGCTACTCCAGGACGCATGATAGATCATTTACGCAATTCCATGTCAGTGGATTTAGATGATCTTGCTGTTCTAATCCTTGATGAGGCAGATCGTCTATTAGAGCTTGGTTTTAATGCTGAAATTCATGAACTTGTTCGCATGTGTCCCAAAAAAAGGCAGACCATGCTATTTTCAGCTACCATGACTGAGGAGGTCGACGAACTTATTAAACTTTCTCTAACAAAGCCCTTGCGTCTTTCAGCTGACCCAACTGCAAAACGGCCAGCAACCTTGACTGAGGAGGTGGTTAGAATAAGAAGAATGCGTGAAGTAAATCAGGAAGCAGTTCTTCTTGCATTGTGTTCCAAAACTTTTACATCTAAAGTGATCATATTCAGTGGAACAAAACAAGCTGCGCATAGGTTGAAGATTATATTTGGATTAGCTGGTTTGAAAGCTGCTGAGCTTCATGGAAATCTTACTCAGGCCCAGCGTCTTGAAGCCTTAGAGCAGTTTAGGAAGCAGCAAGCCGACTTTTTGATTGCAACTGATGTGGCTGCTCGAGGTCTAGATATTATCGGTGTTCAAACAGTCATCAACTTTGCATGTCCACGAGATCTTACCAGTTATGTTCATCGAGTAGGACGTACCGCAAGAGCTGGCAGAGAAGGATATGCTGTCACGTTTGTGACTGACAATGACCGGTCGCTCTTAAAAGCAATTGCAAAGAGGGTCGGTTCAAAGCTGAAGAGCCGTATTGTTGCAGAACAATCTGTAATTAAGTGGTCTCAAACCATTGAGCAAATGGAGGATGAAATTGCGGCAATTCTTGATGAAGAGAGGGAGGAAAGGGCCCTAAGGAAAGCTGAAATGGAGGCAACGAAGGCTGAAAACATGATTGAGCATAGGGAAGAGATATATTCCCGGCCCAAAAGAACTTGGTTTATGACAGGGAAGGAGAAGAAGGCTGCTGCAAAAGCAGCCAAGACGTCTAAGGAAAAGGAGAAGAGCTCTGGGAAGCAAGTAATTAGTGCCGAACAAGCCGAATCCCTAAGAACGAAGGAAAAGAGGAAGCGAGAGAGAGAAAAAAATTTGCCCAGGAAGAAGCGCAGAAAATTGGAAGCTGCTAGAGAGATGTTGGATGATGAAGGTCATTTTGAGAAGCCAGAAGCTAATGAGAAAAATAAGAAAGAAAAGACTGGAATGTCACTTGTTGACGTGGCATATCGACGAGCGAAAGCAGTTAAAGCCGTGAACAAGGCTCTAGATGCTGGCAAAATTGTGAAGAAGGGTCAGAAGAAATCTTCACTAAAGACTCCTTCAAGGACAGAGGAAATGCGCGAGCTTTTCCAAACTGATATGAGTGAGAAAAAACAAAAAAGAGTTGGTGGACCAGGGAAGAAGCCCAAAAGTTCATTCAAAAGCAAGTCAAGGTACAAGCGCAGAGCTGGCTGCTTTTTGGATATTTGGACTGAAGATTTAATGGATTCCGAAGTTGAAACTATTGAGAGAAGATTTACAGCTTTGTTTGGTCAACTCCAAGCAGAGTGCGGCATACTTGAGAGAATGATATACAAGAACAAGAATCAGCATAGGCGTTGTTCTTATTTCAAGTATCTTTTGAAGGTGGGGAGGGATTTACGGCTTCTACAATCCGTGAACTTGGAGGAGCTTGTCATATCGTGCCTCCTTGTTATCAAAGGAGATAAACCTAAACAGAAGGCTCATCTTTTAGAGAGTTTAAAAAGGAGAAAATGCAACAGTGGAAAATATAATTTTCTGGAGCGGATTTTAGGGGCTGCACGCCTGCTGGCAGAGATGGTTGAACCAATGCTGAAGGCTGCAACTGAGGTATCTATTCTGTTTGCTCAGTCTTTTTTCATGGGATTTTCTCTAACAATCATGGCAATGCTCGCACGTCTCCGGGTTTTAGTTCAACAAATATTACTTGATAATGTCACATTGTTCAACATAGTTTCTTCTATCTCTCAAAAGAAGCAGTCAATAAAGATAAAACATGAGGGAATTGAGGTTTTTAGGGAATACTTTCCTGTTAGTGAGGATTTTATCATGTTGGAGTGTGTATGGAAATCAGATAAGTTTGTATTACTTGAGAAGAAGTGTAAGAGTGAAAATGCAAGTAAGAGTGAAGATTCTGGAGGAAGTATCTCCGTCCAAGCATCAGCGATCAACTACAAAAGTATCGAATCTTGTCTTGGAGAAACTGAAAATGACCAACCTGTCTCAGAGAGGAGTAATGCAGACTCCTCTGTTAATGATGAGCCCTCTCATGTCAAAGGTGTAACCAGTGATTTGTTGAATCAGAAAGAGAAGCGAAGTTGTGATGATGAGGAAATAAGAGAGAATCCAAGCACCTTAGAAGGAAGAGAGAATCCAGGCACCATAGAAGGCGGCTTCTCTTTCAATGAACTTCCGCCAAAGGAGGATGGCTTGCAATTGCATGCATCACTGAACTCAACCACTAAACTTGATTCTTCTTCGAAAGTGGCGTTTGTCTCCATCAAGCGTCCTAAATTATCCACACAGCAAGATCTATCTCCATTAGCGGCTTCTGTTAGTGAAAATAGAGAAACTAAACATGATAAAGAGGGAGATACACTTGTTAATCTACTCTCTGAGGGGATTCCAAGGAATAGTGTTTTTTAG 3498 0.4337 MAPGFVFEAPSDEEIERSDFENEEQEQSQEEEAEEQSDYDNDDDDDDDDEEEGEEEEERARVSNKKSQSPWDFAKYSESVAEEHARRSTTSLDQKIAKAIKERSTELRKPVEDDQESSESESDKQEDYRPEEEEDEDGTVGESKSFFAPSDGASFHADSFMELNLSRPLLRACEALGYVKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLLYRPKRVQAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLVVGGLSTKVQEAALRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFNAEIHELVRMCPKKRQTMLFSATMTEEVDELIKLSLTKPLRLSADPTAKRPATLTEEVVRIRRMREVNQEAVLLALCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQADFLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRVGSKLKSRIVAEQSVIKWSQTIEQMEDEIAAILDEEREERALRKAEMEATKAENMIEHREEIYSRPKRTWFMTGKEKKAAAKAAKTSKEKEKSSGKQVISAEQAESLRTKEKRKREREKNLPRKKRRKLEAAREMLDDEGHFEKPEANEKNKKEKTGMSLVDVAYRRAKAVKAVNKALDAGKIVKKGQKKSSLKTPSRTEEMRELFQTDMSEKKQKRVGGPGKKPKSSFKSKSRYKRRAGCFLDIWTEDLMDSEVETIERRFTALFGQLQAECGILERMIYKNKNQHRRCSYFKYLLKVGRDLRLLQSVNLEELVISCLLVIKGDKPKQKAHLLESLKRRKCNSGKYNFLERILGAARLLAEMVEPMLKAATEVSILFAQSFFMGFSLTIMAMLARLRVLVQQILLDNVTLFNIVSSISQKKQSIKIKHEGIEVFREYFPVSEDFIMLECVWKSDKFVLLEKKCKSENASKSEDSGGSISVQASAINYKSIESCLGETENDQPVSERSNADSSVNDEPSHVKGVTSDLLNQKEKRSCDDEEIRENPSTLEGRENPGTIEGGFSFNELPPKEDGLQLHASLNSTTKLDSSSKVAFVSIKRPKLSTQQDLSPLAASVSENRETKHDKEGDTLVNLLSEGIPRNSVF 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1448 1165 MobiDBLite consensus disorder prediction 101 147 - -
Lele03g1448 1165 CDD SF2_C_DEAD 375 507 - -
Lele03g1448 1165 SMART helicmild6 413 498 IPR001650 -
Lele03g1448 1165 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 115 715 - -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 116 139 - -
Lele03g1448 1165 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 189 363 IPR014001 -
Lele03g1448 1165 Pfam Helicase conserved C-terminal domain 394 498 IPR001650 -
Lele03g1448 1165 CDD DEADc_DDX27 169 364 - -
Lele03g1448 1165 Pfam DEAD/DEAH box helicase 182 352 IPR011545 GO:0003676|GO:0005524
Lele03g1448 1165 Coils Coil 536 583 - -
Lele03g1448 1165 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 309 317 IPR000629 -
Lele03g1448 1165 Pfam Domain of unknown function (DUF4477) 789 934 IPR027951 -
Lele03g1448 1165 Coils Coil 622 642 - -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 14 57 - -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 1018 1047 - -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 1 72 - -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 101 115 - -
Lele03g1448 1165 SMART ultradead3 177 378 IPR014001 -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 1018 1093 - -
Lele03g1448 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 518 IPR027417 -
Lele03g1448 1165 Gene3D - 378 637 IPR027417 -
Lele03g1448 1165 Gene3D - 113 365 IPR027417 -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 77 96 - -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 1124 1148 - -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 1048 1069 - -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 644 676 - -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 602 676 - -
Lele03g1448 1165 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 158 186 IPR014014 GO:0003724
Lele03g1448 1165 MobiDBLite consensus disorder prediction 602 617 - -
Lele03g1448 1165 MobiDBLite consensus disorder prediction 727 753 - -
Lele03g1448 1165 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 393 537 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1448 Lele-ChrLele03 8823181 8835993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1448 146 515 Eukaryotic Initiation Factors Gene Family AT3G13920 33.512 5.75e-52 187